Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2402g00017 ATGGAAGCACCATTTAAGGGAATAATTGAAGATTTCAAGGGAAGATTTCAGTGCTATAAACAAGATTGGATTTGTGATATCTGTTCTGGTCCTAGCACATGGGCTCCAACTTTCTACATATTCTTTGCCTCTGCCCTCCCTGTTATTGTTTTTGGACAGCAACTTCATAGGGATACGGATGGAAGTATGGGCATATTGGAAACAATGGCATCTACTGCTATTTGTGGAATTATCCACTCAATATTTGGTGGCCAACCTTTGTTAATTTTAGGTGTTGCTGAACCCACTGTCATAATGTACACTTACTTGTACAGTATTTGCGAAAGAACCCCTGCACTGGGTAGAGAGCTCTTTCTGGCTGCGCTTAGTTGGGTTTGTGTTTGGACGGGATTCTTCCTGGTGGTGCTTGCAATTTTTAATGCTTGCTCAATTATCTCAAGGTTTACAAGAATTGCTGGGGAGTTATTTGCCATGCTCATAACTGTTCTTTTCTTTCAAGAGGCTGTAAAGGGATTGATAGGAGAGTTCAACGTGGTCAATAAAGGAAATTCTTCTGCAGAGGAATTTCAATTCCGCTGGTTGTATACAAATGGATTACTTGCAATCATTTTCAGTATTGGATTACTTTTCACTGCCCTAATAAGCAGAAGAGCAAGAGCATGGAAATATGGAACAGGGTGGCTACGAGGATTTATAGCAGATTATGGGATTCCACTGATGGTAGTGTTATGGACTGCACTATCTTATGCTGTACCAAGAAAAGTTCCAGATGGCATTCCTAGAAGGCTTTTTTCTCCTCTACCGTGGGAACCTGAATCACTCTATCACTGGACAGTAGTGAAGGATATGTGGAAGGTACCCCCAGCTTTTGTATTTGGGGCAAGTATTCCAGCTCTGATGATAGCAGGCTTATACTTTTTTGATCACAGTGTAGCTGCGCAGATGACACAACAGAAAAAATTTAACCTTCAAAAACCATCAGCCTACCACTATGATGTTTTCCTGCTTGGAATAATGACTCTGATTTGTGGGCTCCTTGGTCTTCCTCCTTCAAATGGAGTCCTTCCACAGTCCCCCATGCATACAAAGAGTTTAGCAGTTCTTAAGAAAAAGGTTAAAGAATTGGAGAGTTCAAAGGAATCTAGGAACAATGGTGGTGCGGAAGAAAGTTTTGATGAGAAACAGAGATATGAATATCTACCAGTCGAGGTTCATGAGCAAAGAGTGACGAACCTTTTGCAGTCTGTCCTGGTCGGTGTCTCAATCCTAGCCATGCCTGTAATCAGAGAGATACCAACCTCAGTTCTATGGGGATATTTTGCTTACATGGCAATTGATAGTCTCCCAGGAAATCAGTTCTGGGAAAGGATATTGCTCCTCTTCATCACCCCAGGCCGCCGTCACAAAATTTTCGAAGATTTTCATGCCTCTTTTCTGGAGAAAGTACCATTCAAGACCATAGTTACATTTACACTCATACAGTTAGGATATTTTTTAATATGTTACGGGATAACTTGGATTCCTTTTGTTGGAATACTGTTCCCTGTACCATTCTTCCTTCTCATATTCATAAGAGAGCGCTTGCTTCCAAAGATATTCAAGCCTAACCATCTCGAAGAACTAGATGCTTCTGGGTATGAGGAAATTGCTGGAGTTCCACCTGCTATGGATATGGAGTCAGATACTGATACTGGAGGAACTGAAGAGGAATTCTGCTATGCAGAGATATTAGATGAGATGACAACCAACAGGGGAGAGTTGAAACTGATAACTACCAGCAGAAATCATAGCTTCAGTGATGACAGACAAGTTCACGTTTGTCCTAGAGAAGATGCTGTCTGA 1842 0.4142 MEAPFKGIIEDFKGRFQCYKQDWICDICSGPSTWAPTFYIFFASALPVIVFGQQLHRDTDGSMGILETMASTAICGIIHSIFGGQPLLILGVAEPTVIMYTYLYSICERTPALGRELFLAALSWVCVWTGFFLVVLAIFNACSIISRFTRIAGELFAMLITVLFFQEAVKGLIGEFNVVNKGNSSAEEFQFRWLYTNGLLAIIFSIGLLFTALISRRARAWKYGTGWLRGFIADYGIPLMVVLWTALSYAVPRKVPDGIPRRLFSPLPWEPESLYHWTVVKDMWKVPPAFVFGASIPALMIAGLYFFDHSVAAQMTQQKKFNLQKPSAYHYDVFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKKKVKELESSKESRNNGGAEESFDEKQRYEYLPVEVHEQRVTNLLQSVLVGVSILAMPVIREIPTSVLWGYFAYMAIDSLPGNQFWERILLLFITPGRRHKIFEDFHASFLEKVPFKTIVTFTLIQLGYFLICYGITWIPFVGILFPVPFFLLIFIRERLLPKIFKPNHLEELDASGYEEIAGVPPAMDMESDTDTGGTEEEFCYAEILDEMTTNRGELKLITTSRNHSFSDDRQVHVCPREDAV 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2402g00017 613 PANTHER ANION EXCHANGE PROTEIN 3 550 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vium2402g00017 613 Pfam HCO3- transporter family 4 178 IPR011531 GO:0006820|GO:0016020
Vium2402g00017 613 Pfam HCO3- transporter family 196 493 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2402g00017 Vium-Chr2402 75065 80499 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2402g00017 4 612 Antiporters AT4G32510 60.059 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2402g00017 K24194 - gmx:100787412 902.123