Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2402g00013 ATGTCTTCGGTGATATCATCATCCTCGTCTCGTGTTTTTGATGCCATCAATGAATGTGTGTTTCTGCTTCAATCAGACTCGGTTGAAGTTCAAGAGAAAGCTCTTCAAATGCTGGCTTCCATCACGAAGGTCAGTTCCCAAAACAGAACCTCACTGGCTCAAACAGAAGGAGCCATTCCAACAATAGCCACACTAACAAACTCTTCCTCTCCCATCATCCAAACACTTTCTTTGTTAACCCTCTTCAACCTATCCCTCAACCCAGATCTGAAGCAATCTCTTGCTGACATGGAAACCATTTACTACCTCAACTCCCTCATCACCAACTCATCATTTTCCCTCGACTCTTCCAAACTGGCCTCCTCATTGGTTTGCAGCTTGGCCATGCATGACAAAAACAAGGCCAAGTTTGGGGTGGCAGGCACAGTTCAGTTGCTAGTGAAAGCAGTTGAAGGGTGTCACGGTTCTGATGCGAACCACCTTCTGAGTTCTCTTGCTGAGCTTGTTCATTTTCATGGAAACTGCACTCTGGCAGTGCGAGCCGGGGCAGTGGCAGTGCTGCTTAAGGTGGTGAAGGGTACTGATAACGAGGACTTGGCAGGAACTTCTCTCGCTGTTCTCAGTCTCCTTGCGAGGTTTGATGAAGGGTTGAATGGTTTGAAGAAAACGGATGAGATAATTAGAGTAATGTTGAATGTGTTGAAGGGTAGGTCTCTGTTGAGCAAGGAGGGTGCTGCTGATATCCTTATTCGTCTTTTTGATGACAGTGAAGATTGTGTCACTGAGGCTTTGATGTTGCCAGAATTTTCAACCGTCTTGGCTGATCTTTGTGTGAGGGGTTCGGTGAGAGTTCGTGACAAGGCGGATTTGTTGATGAAGAAGATGGCACAGATGAGCTTGGATTCTGATATGGAAGTATGCTCCCTCCATGGTTAA 936 0.4626 MSSVISSSSSRVFDAINECVFLLQSDSVEVQEKALQMLASITKVSSQNRTSLAQTEGAIPTIATLTNSSSPIIQTLSLLTLFNLSLNPDLKQSLADMETIYYLNSLITNSSFSLDSSKLASSLVCSLAMHDKNKAKFGVAGTVQLLVKAVEGCHGSDANHLLSSLAELVHFHGNCTLAVRAGAVAVLLKVVKGTDNEDLAGTSLAVLSLLARFDEGLNGLKKTDEIIRVMLNVLKGRSLLSKEGAADILIRLFDDSEDCVTEALMLPEFSTVLADLCVRGSVRVRDKADLLMKKMAQMSLDSDMEVCSLHG 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2402g00013 311 Gene3D - 122 307 IPR011989 -
Vium2402g00013 311 Gene3D - 6 121 IPR011989 -
Vium2402g00013 311 PANTHER U BOX DOMAIN-CONTAINING 15 293 - -
Vium2402g00013 311 SUPERFAMILY ARM repeat 14 296 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2402g00013 16 288 U-box Gene Family AT1G23030 25.993 3.73e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2402g00013 - - vra:106761892 495.352