Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2398g00003 ATGTTGTCGTCTTTTTGTTTGAACTTTCCTTGCGCTGTACAAGGAACTATATTTTCTCAGAGGAAACAATTATCTCATGGATGCACAAACCAAAATTCAAAGGATTATTACCTAATGCAGGATAGTTCCATGTTGCGTTCTGAAAAATCATTGAGGAGAACACTCTTCCTTTCTGTCTTGGTCTCAACTGGTTTTTTCCCAACTTTGTATTCTTATGCAAAGACAAAGAGTAAGAATCCTTATGATGAAAAACGATTGCTAAAACAAAATCAGCGGATACAGAAGGAAAACAATGCGCCAGAGGACTTCCCAAATTTTATTAGAGAAGGTTTTGAAGTTAAAATAGTATCTTCAGAGAACTATGTAAAGAGTAACTCGGGACTCATATACCGGGATTTTGTAGTTGGTCAAGGTGATTGCCCAAAGGATGGTCAGCAGGTCACTTTTCACTACATTGGTTATAACGAATCTGGTCGTCGAATTGACAGCACTTACTTGCAGGGTACTCCTGCCAAAATCCGCATGGGTACCAAGGCATTAGTTCCAGGATTTGAGGAGGGAATCAGAGACATGAGACCAGGTGGGAAGAGAAGAATCATCATCCCCCCTGAACTTGGACCACCAGTAGGACCTTCAACCTTTTTCAGCTCAAAACAGTTTGAAGTTTTTGATGTGGAGCTATTAAGCGTGCAAAATTGTGAAAGGAGGACCGTAGCCTTTTACTCAGATGTAATTTGCAATTGA 744 0.4005 MLSSFCLNFPCAVQGTIFSQRKQLSHGCTNQNSKDYYLMQDSSMLRSEKSLRRTLFLSVLVSTGFFPTLYSYAKTKSKNPYDEKRLLKQNQRIQKENNAPEDFPNFIREGFEVKIVSSENYVKSNSGLIYRDFVVGQGDCPKDGQQVTFHYIGYNESGRRIDSTYLQGTPAKIRMGTKALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQNCERRTVAFYSDVICN 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2398g00003 247 Gene3D - 79 239 IPR046357 GO:0003755
Vium2398g00003 247 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 7 247 IPR044239 -
Vium2398g00003 247 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 144 231 IPR001179 GO:0003755
Vium2398g00003 247 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 141 227 IPR001179 GO:0003755
Vium2398g00003 247 SUPERFAMILY FKBP-like 73 231 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2398g00003 139 233 Calmodulin-binding Proteins AT5G48570 34.021 2.70e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2398g00003 - - var:108347486 491.5