Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2395g00018 ATGGAAGCTACACACATTCGAGAAAAGGGTGTTGTTGTTGAGGGAAGTGAAAACATTGCTGCTGGGAAAGAAAATGAAGAACTTCTCAAGAAGATTATTGCAACTCATCCTTTGTATGAAGTTTTGATTCAATCTCACATCAACTGCTTGAAGAAAAAGACACAGGCCATTGCAAAAAGCTTCCATTTTAGTATAACAGTGGTCACCTACATGGTGGGATTAAGTGAAGCAGAAGTGTTTGATGATGATGAACTGAAGAAGCTGATGAATTCAAAGTCCAAATTAGCACCTGGTGCAAACACTTCAGAGTTAGATCACTTCATGGAAGCTTATTGCATGGCACTGAGCAAGCTGAAAGAGGCAATAGAAGAACCAACAAAAGAAACGAATGCTTTCATCAGAGCCACGTATCATGAACTAAAGCAACTGGAAGAAGTGAAGAACCCATAA 450 0.3933 MEATHIREKGVVVEGSENIAAGKENEELLKKIIATHPLYEVLIQSHINCLKKKTQAIAKSFHFSITVVTYMVGLSEAEVFDDDELKKLMNSKSKLAPGANTSELDHFMEAYCMALSKLKEAIEEPTKETNAFIRATYHELKQLEEVKNP 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2395g00018 149 Pfam KNOX2 domain 102 143 IPR005541 GO:0003677|GO:0005634
Vium2395g00018 149 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 1 148 - -
Vium2395g00018 149 SMART KNOX2_2 93 145 IPR005541 GO:0003677|GO:0005634
Vium2395g00018 149 Pfam KNOX1 domain 29 51 IPR005540 GO:0003677|GO:0005634
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2395g00018 27 143 Homeobox Transcription Factor Family AT4G08150 29.060 2.06e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2395g00018 - - vum:124830379 294.278