Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2395g00017 ATGATAACCAGATCGAGGAAATTGAAGCGCAAGCTCGAGTTAGAGCCACCTCCGGTCATCGTCACTAAGAAGCATAGGCAGAAGTTGCCTCGCCGGCGAAGGCAAAACTTCTCTCCTGTTCTTCTAGTCAGTGACTCTTGCCAGAATCCTCGTTTCTCCGTGGATTCCAGTTCCGGTTCTGACTTTGCTGCAGGCGGTGCTTCTTGCAACTCCAGCAGAGCTTCCATAGCCGGCAAGGGAAACAGGAACTCAAGAAATGAATCATCGATCGATTCAATGAGAAATCAGAGGTTCGAGAAACGAGATGAGAACGAAGTGGAGGTGTCGGAGTCTTCGTGCGCGGACTCCAATTCGTTTGCTCAAGATCGAAGCAGGAGGTCAATTCTGAAGTTCAAAAGCGGAAGAGAATATAATAATCTGAGAGGAGAAGATGACGTTTCGGAAGTTTGCATAAAATCGGATATTACTGGTATTCTGAAGTTGAACAGCAGAAGCCAGAGTAAGAACGTAGAAAAAAATGACGACGTTTCGTGCGGGAAATCAGAGATAACTTGCGAGGAACAGTTCAATTTGAAGTCCTCCAGTGGAAACGGAAACATGAAAATCTCTTCGGAGTCAAACGGAAACGACGTCGCATCGTTTAGTTCCTTTGTTCGCGCGTCGCTAGAGGAGGAAAAGAATAGCAGCAAGGAAAACAGAGCGTTGGAATGTGAATACTCTGCAGGCTCTAAAAATCTCCATGCGGAAGAGAATTGCGGGGATTTAGTAGTGCAATCGATGACGAGGCAGGAATCGGAAAATTACGACGTCGTGGACCTCACTTGCTCTGAGGAACTGCGTTTCTCATACTGTGACGACGATGACGAATCGGAATATTGTTCCAGTCAGGGAACTGTGTTCTCTGAATTTCATTCTGAGATTTTCGGTGAATGCTCGCAGCAGGAGCTTTCGGATTACACTCCGTCGCTGTTCGTGGATTCTGGAAGCCAGTTTTCCGAGGGATCCGACGGAGAAACTTCTTCACCAACGTATTTGTTGTTCCTTCAGTATCGCAAGGAGTTCACGACTCTAACTTCCGCTTCTCCAGTGGTGAACTCTTCTTCAAGTGACGAAGATGAAGCTGATTTTGTAAGATTCGAAGATTCTGATGACGAAGACAGCTACCAGATGCTGAGGAAGAGGGAGAGGAAGCAAGGTTTTGTGTCGAATTATGGTGAAAGATATTTCTCTACCACTGAATTCGGAGAGACCGTGCTTGAGCAACGTGCGCAAATGGTTCACTGGATCGTTGAGCAATCTTGTCGAAAACAGCTTCGGCAAGAGACGATTTTTCTTGGCGTCAACCTACTTGACCGTTTCCTAAACAAAGGATACTTCAAAGTCCAAAAACGCCTTCAAATTGTTGGAATAGCTTGCCTCACGTTAGCAACCAGGATCGAAGAAAATCAGCAATACAACAGGGTGGGGCAAAGCAATTTCAACATAGGAAACAATAGGTACAGTAGAGGCGAGGTGGTAGCTATGGAATGGATGGTGCAGGAGGTGCTCAAGTTTCAGTGCTTTCGGCCTACCATCTACAATTTCTTGTGCTTTTACCTAAAAGCAGCCAATGCTGATGCAGTCATTGAGAAGAGGGTCAAGTATCTGGCAGTGCTGACACTGTCATCTCATGAGCAACTGTGTTACTGGCCTTCAACAGTTGCTGCAGCACTTGTAGTCCTGGCTGGTCTTGAATTCAATCAAAGTTCACCGCTCAAAGTAATCGGGATCCACGTTAGATCAAAAGATGAGAATTTGTACGAGTGCATAGAGAGCCTGGAAACGCTGTTACGCTGTATAGGATAA 1845 0.4602 MITRSRKLKRKLELEPPPVIVTKKHRQKLPRRRRQNFSPVLLVSDSCQNPRFSVDSSSGSDFAAGGASCNSSRASIAGKGNRNSRNESSIDSMRNQRFEKRDENEVEVSESSCADSNSFAQDRSRRSILKFKSGREYNNLRGEDDVSEVCIKSDITGILKLNSRSQSKNVEKNDDVSCGKSEITCEEQFNLKSSSGNGNMKISSESNGNDVASFSSFVRASLEEEKNSSKENRALECEYSAGSKNLHAEENCGDLVVQSMTRQESENYDVVDLTCSEELRFSYCDDDDESEYCSSQGTVFSEFHSEIFGECSQQELSDYTPSLFVDSGSQFSEGSDGETSSPTYLLFLQYRKEFTTLTSASPVVNSSSSDEDEADFVRFEDSDDEDSYQMLRKRERKQGFVSNYGERYFSTTEFGETVLEQRAQMVHWIVEQSCRKQLRQETIFLGVNLLDRFLNKGYFKVQKRLQIVGIACLTLATRIEENQQYNRVGQSNFNIGNNRYSRGEVVAMEWMVQEVLKFQCFRPTIYNFLCFYLKAANADAVIEKRVKYLAVLTLSSHEQLCYWPSTVAAALVVLAGLEFNQSSPLKVIGIHVRSKDENLYECIESLETLLRCIG 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2395g00017 614 ProSitePatterns Cyclins signature. 422 453 IPR006671 -
Vium2395g00017 614 MobiDBLite consensus disorder prediction 54 115 - -
Vium2395g00017 614 Gene3D - 410 516 - -
Vium2395g00017 614 SMART cyclin_7 427 514 IPR013763 -
Vium2395g00017 614 SMART cyclin_7 527 608 IPR013763 -
Vium2395g00017 614 Pfam Cyclin, C-terminal domain 523 610 IPR004367 -
Vium2395g00017 614 PANTHER CYCLINS 364 605 IPR039361 -
Vium2395g00017 614 Gene3D - 517 613 - -
Vium2395g00017 614 MobiDBLite consensus disorder prediction 92 108 - -
Vium2395g00017 614 SUPERFAMILY Cyclin-like 522 611 IPR036915 -
Vium2395g00017 614 MobiDBLite consensus disorder prediction 54 91 - -
Vium2395g00017 614 SUPERFAMILY Cyclin-like 383 519 IPR036915 -
Vium2395g00017 614 Pfam Cyclin, N-terminal domain 416 519 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2395g00017 Vium-Chr2395 156330 161819 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2395g00017 381 583 Core Cell Cycle Gene Families AT1G80370 34.862 1.00e-22 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2395g00017 K21777 - gmx:100817658 841.262