Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vium2395g00010 | ATGGGTCTTAGTTTGAAGATGCAGAGCCACCATCCTGTGGCTTTGAGGTTGTATGATCAAATGGGATCTAAAAGAAAGTACACTTTCATTCAGGCTCATAGAGCTTGGCTTCCAAAGTTCTTGCTGCTGTGGATCCTTCTAATGGCTTTGATAAGTTGGTGCATCTTTAGCAAAATGGACGATGACACTAAAGTCAGAAGGAAGGAGGTGCTGGGTAGCCTCTGTGATCAAAGGGCAAGAATGCTACAGGATCAGTTTAGTGTTAGTGTTAACCATGTCCATGCCCTTGCCATCCTCGTTTCAACCTTCCATTACTACAGATACCCTTCTGCCATTGACCAGGAAACCTTTGCCGAGTATACAGCCCGGACAGCATTTGAACGGCCATTACTGAGTGGTGTGGCATATGCACAAAGAGTTGTTAAATCTGAGAGAGAGAGATTTGAGAAAGAACATGGATGGGTTATAAAGACAATGGAAGAGAAGTCTTCACTTGTTAGAGATGAGTATGCCCCGGTGATATTTGCACAAGAAACTCTCTCATATCTTGAGTCTCTTGATATGATGTCTGGACAGGAGGACCGAGAAAACATTTTAAGGGCTAGAGCCACTGGGAAAGCAGTTCTGACGAGCCCTTTCAGGCTGTTGGGTTCTCACCATCTTGGTGTGGTTTTAACATTTCCTGTGTACAAGTCCAAGCTCCCTCAGAAGCCAACAGTGGAAGAACGCATCGAAGCAACTGCAGGATATGTTGGAGGATCCTTTGATGTTGAGTCCCTTGTTGAGAATTTACTTGGACAACTTGCTGGTAACCAAGCAATTTTGGTGAATGTATATGATATCACAAACTATACTAATCCACTAATAATGTATGGAAAGCCCTATGAAGAAGGTGATATGTCTCTTGCCCATGAAAGCAAGCTTGATTTTGGAGACCCATTCAGGAAACATCAAATGATATGTAGGTACCATCAGAAGGCACCAACAAATTGGATTGCTGTTACCACGGCATTTCTATTCTTTGTGATTCTTATATTAGTGGGGTACATTTTATACGGTGCTGGAAATCATATTGTCAAAGTGGAAGATGATTTCCATGAAATGCAGGAACTGAAAGTTCGAGCAGAATCAGCCCACGTTGCCAAGTCCCAGTTTCTAGCTACGGTCTCTCATGAAATTAGAACACCCATGAATGGTATCTTAGGAATGCTTGCTCTGCTTCTAGATACAGAATTGAGTTCAACCCAACGGGATTATGCTCAGACTGCTCAGGCATGTGGAAAGGCACTGATAACATTAATAAATGAGGTGCTGGACAGAGCTAAAATTGAAGCTGGCAAGTTAGAGCTGGAGGCTGTTCCATTTGATCTTCGTTCCATACTTGATGATGTTCTTTCCCTTTTCTCTGAGAAATCTAGACACAAAGGTTTAGAGCTGGCTGTGTTTGTTTCTGATAAAGTACCGGATATTGTCATGGGAGATCCTGGGAGATTCAGACAAATAATAACAAATCTTGTTGGCAATTCTGTAAAATTCACTGAACACGGACATATATTTGTCAAAGTCCATCTAGGGGACAATAGAAAGTGCATAATGAATGGAAAACATGAGACTTTTCTGAATGGAGAATCAGATGAAGTTTTCCTTATATCTGATGATTATCATTTCAAAACCTTAAGTGGACGTGAAGCAGCTGACGAACGGAACAGCTGGGATAATTTTAAGCTCCTAATTGGTGATGAAAAATGTTGCCTTGATTCTTCAAGAGAAATGGTGGCTACTTGTGAAACATCTGAACAAGTCACATTGAGGGTGTGTGTGGAAGACACAGGAATTGGAATCCCTTTTTCAGCTCAGGATAGGATATTCATGCCTTTTGTGCAGGCTGACAGCTCAACTTCACGAAATTATGGGGGCACTGGTATTGGCTTGAGTATCAGCAAATGTCTGGTTGAACTGATGGGTGGTAAGATAAACTTCATAAGCCGACCCCAGATTGGGAGCACTTTCTCGTTTACTGCAGTTTGTGGAAGATTTAAGAAAGGTCCGGTTACTGACATGAAGAAAAATTTGGAAGATCTTCCTTCAAGTTTTAGAGGGCTGAAAGTCATCGTTGTTGATGGAAAACCTGTTAGAGCTGCTGTGACTAGATACCATTTGAAGAGACTAGGTATACTAGTTAAGGTTGAAAGTAGCATCAGTAAGGCTGTTGCTTTATATGGTAAAAGTTGTTCTCTGGACTCAGGAATGTTCCTGCCAGATATTATCATGGTTGAGAAGGACACGTGGATATCTGGAGAAGATGGGATTTTCAATATGTGGAAACAGAATGGTCACATGTTTAAGATACCTAAAATGATCCTTCTGGCAACCAATATTAGTAACATTGAATTTGATAAAGCGAAGGCCATGGGTTTCACTGATACTGTGATCATGAAGCCCCTGAGAGCTAGTATGGTGGCTGCTTGTCTTCAGCAAGTTTTGGGGATGGGGAAGAAGAGGCAGCTAGGGAAAGACATGCCAAATGGTTCTGCTTTTCTACACAGCCTTCTCTATGGAAAGAAAATCTTGGTGGTTGATGACAATGGGGTAAACCGAAGGGTTGCTGCAGGTGCTCTGAAAAAGTTTGGAGCTGATGTGAAGTGTGCAGAAAGTGGCAAAGCAGCACTTGAAATGCTGCAATTGCCTCACAATTTTGATGCTTGCTTCATGGACATTCAAATGCCAGAAATGGATGGATTTCAAGCAACTAGCCAAATTCGGATGATGGAGAGCAAGGCAAATGAGGAGATGAAGAATGGGAGTGAGTGGCATGTGCCTATATTGGCCATGACAGCTGATGTGATCCATGCTACATATGATGAGTGCTTGAAACGTGGCATGGATGGATATGTATCAAAGCCATTCGAGGAAGAGAATCTGTATCAGGAAGTTGCAAAGTTTTTCAAAACAAAGACCATCTCAGACTCATAA | 2973 | 0.4198 | MGLSLKMQSHHPVALRLYDQMGSKRKYTFIQAHRAWLPKFLLLWILLMALISWCIFSKMDDDTKVRRKEVLGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRYPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVKSERERFEKEHGWVIKTMEEKSSLVRDEYAPVIFAQETLSYLESLDMMSGQEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKSKLPQKPTVEERIEATAGYVGGSFDVESLVENLLGQLAGNQAILVNVYDITNYTNPLIMYGKPYEEGDMSLAHESKLDFGDPFRKHQMICRYHQKAPTNWIAVTTAFLFFVILILVGYILYGAGNHIVKVEDDFHEMQELKVRAESAHVAKSQFLATVSHEIRTPMNGILGMLALLLDTELSSTQRDYAQTAQACGKALITLINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIITNLVGNSVKFTEHGHIFVKVHLGDNRKCIMNGKHETFLNGESDEVFLISDDYHFKTLSGREAADERNSWDNFKLLIGDEKCCLDSSREMVATCETSEQVTLRVCVEDTGIGIPFSAQDRIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGKINFISRPQIGSTFSFTAVCGRFKKGPVTDMKKNLEDLPSSFRGLKVIVVDGKPVRAAVTRYHLKRLGILVKVESSISKAVALYGKSCSLDSGMFLPDIIMVEKDTWISGEDGIFNMWKQNGHMFKIPKMILLATNISNIEFDKAKAMGFTDTVIMKPLRASMVAACLQQVLGMGKKRQLGKDMPNGSAFLHSLLYGKKILVVDDNGVNRRVAAGALKKFGADVKCAESGKAALEMLQLPHNFDACFMDIQMPEMDGFQATSQIRMMESKANEEMKNGSEWHVPILAMTADVIHATYDECLKRGMDGYVSKPFEEENLYQEVAKFFKTKTISDS | 990 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vium2395g00010 | 990 | Gene3D | - | 445 | 677 | IPR036890 | - | |
| Vium2395g00010 | 990 | Gene3D | - | 59 | 111 | - | - | |
| Vium2395g00010 | 990 | SMART | HKATPase_4 | 493 | 678 | IPR003594 | - | |
| Vium2395g00010 | 990 | FunFam | Histidine kinase 4 | 112 | 327 | - | - | |
| Vium2395g00010 | 990 | Pfam | Response regulator receiver domain | 856 | 978 | IPR001789 | GO:0000160 | |
| Vium2395g00010 | 990 | Pfam | His Kinase A (phospho-acceptor) domain | 381 | 446 | IPR003661 | GO:0000155|GO:0007165 | |
| Vium2395g00010 | 990 | ProSiteProfiles | Response regulatory domain profile. | 855 | 982 | IPR001789 | GO:0000160 | |
| Vium2395g00010 | 990 | SMART | REC_2 | 854 | 978 | IPR001789 | GO:0000160 | |
| Vium2395g00010 | 990 | Gene3D | - | 355 | 444 | - | - | |
| Vium2395g00010 | 990 | SUPERFAMILY | CheY-like | 853 | 982 | IPR011006 | - |
Showing 1 to 10 of 31 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vium2395g00010 | K14489 | - | gmx:100813204 | 1808.11 |
Showing 1 to 1 of 1 entries