Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2395g00006 ATGGAAAATGGAAACAACAATGCAGTGGCGCTTCAGAACACGCACGTCAAACTTCTCGCCTTCGATCTCCTATCCTTGACACAATTTCCTTTCCGTTCTCCCGACGCCGCGACGTCGTTTCTCCGCAGAGGAATCCCAATCTCGCGCGTCGAAACCCTTGGCACTATCACCCTGCTCCACCTCAAGCCCGATAGACTCCTCCGCTTCGCCATTGACGATGGCACCGGATGCGTCCCCTGTGTGCTGTGGCTTAACAACGCCAATTCCCCCTCCGTCGTGCGCCGCCGCCGCCACGAGCTCGCCGCGCGCTTCGTCGAAGTGGTGAAGTTTGGAGCGGTTGCGAGGGTGAGGGGCAGACTGAGCCGGTACAAAGGTTGCGTGCAGGTGACCGTGTCGGACGTGGTGACGGAGAGAGATCCGAACGCCGAGATCTTCCACCGCCTGGACTGCATCAGGTTGGCTCGCAACTGTTACAATCTTTTGCCTTCACCTTCTTTAAGAGGATAA 507 0.5759 MENGNNNAVALQNTHVKLLAFDLLSLTQFPFRSPDAATSFLRRGIPISRVETLGTITLLHLKPDRLLRFAIDDGTGCVPCVLWLNNANSPSVVRRRRHELAARFVEVVKFGAVARVRGRLSRYKGCVQVTVSDVVTERDPNAEIFHRLDCIRLARNCYNLLPSPSLRG 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2395g00006 168 Pfam OB-fold nucleic acid binding domain 66 134 IPR004365 GO:0003676
Vium2395g00006 168 SUPERFAMILY Nucleic acid-binding proteins 40 152 IPR012340 -
Vium2395g00006 168 Gene3D - 6 161 IPR012340 -
Vium2395g00006 168 PANTHER REPLICATION PROTEIN A-RELATED 10 158 IPR040260 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2395g00006 31 153 Core DNA Replication Machinery Family AT2G24490 26.829 2.27e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2395g00006 K23312 - gmx:112997612 267.7