Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2378g00012 ATGGCGGCGCCGACAGTGAAGGTGTACGGTCCACCCATGTCCACTGCCGTGTCCAGAGTCTTGGCCTGTCTGTTGGAGAAAGACGTCAACTTCCAACTCCTTCCCGTTAACATGTCCAAAGGGGAACACAGGACCCCTGAATTCCTCAAGCTTCACCCTTTCGGACAAGTACCTGCATTTCAAGACGCCGACAACGTTTCCCTCTTCGAGTCCAGAGCGATATGCCGCTACGTATGCGACAAATACGGGGACAAAGGGAACAGGGATCTCTACGGTAGCAACCCTCTGGCCAAGGCCTCCATAGATCAATGGCTGGAGGCAGAAGGTCAGAACTTCAACCCACCTTCCTCCACTCTGGTCTTCCAGCTGGCATTCGCGCCCCGAATGAAGATCAAGCAAGACGAGGGTGCCATCAAGCAGAGCAAAGAAAAGCTGGCGAAGGTGCTGGATGTGTACGAGAAGAGGCTCGGAGTGAGCCGGTTCTTGGCTGGGGATGAGTTCTCTCTCGCCGATCTTTCCCATCTTCCGAACGCCCACTACCTGCTCGCCGCCCCCGACGCTGCTCCTCTCTTCAGTTCTCCCAACGTCGCCAGGTGGTGGGACGAGATCTCCTCCCGCGACTCCTGGAAGAAAGTCGTCGACTTGCAGCGAGGTGCCTGA 660 0.5667 MAAPTVKVYGPPMSTAVSRVLACLLEKDVNFQLLPVNMSKGEHRTPEFLKLHPFGQVPAFQDADNVSLFESRAICRYVCDKYGDKGNRDLYGSNPLAKASIDQWLEAEGQNFNPPSSTLVFQLAFAPRMKIKQDEGAIKQSKEKLAKVLDVYEKRLGVSRFLAGDEFSLADLSHLPNAHYLLAAPDAAPLFSSPNVARWWDEISSRDSWKKVVDLQRGA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2378g00012 219 CDD GST_N_Phi 5 81 - -
Vium2378g00012 219 FunFam Glutathione S-transferase F2 5 90 - -
Vium2378g00012 219 CDD GST_C_Phi 96 213 IPR034347 -
Vium2378g00012 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 219 IPR010987 -
Vium2378g00012 219 Gene3D Glutaredoxin 4 92 - -
Vium2378g00012 219 FunFam Glutathione S-transferase F2 92 213 - -
Vium2378g00012 219 SFLD Glutathione Transferase (cytosolic) 5 215 IPR040079 -
Vium2378g00012 219 SFLD Main.5: Phi-like 5 215 - -
Vium2378g00012 219 SUPERFAMILY GST C-terminal domain-like 87 214 IPR036282 -
Vium2378g00012 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 86 IPR004045 -
Vium2378g00012 219 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 214 - -
Vium2378g00012 219 SUPERFAMILY Thioredoxin-like 4 86 IPR036249 -
Vium2378g00012 219 Pfam Glutathione S-transferase, C-terminal domain 118 207 IPR004046 -
Vium2378g00012 219 Gene3D - 93 213 - -
Vium2378g00012 219 Pfam Glutathione S-transferase, N-terminal domain 5 78 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2378g00012 Vium-Chr2378 86255 87450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2378g00012 8 217 Glutathione S-transferase Gene Family AT2G47730 48.815 5.09e-67 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2378g00012 K00799 - zju:107422694 354.755