Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2377g00005 ATGGTGAGGGTGCATGAGAAAGTGAAGGAGTTTGTGAGGCACAGATGGGTGGTGTTTGTGTGCGCGATGTGGGACATGTCATTCGCAGGCACCTCGTACATGTTCGGGAGCATATCGCCGGTGATAAAGAGCAGCATGGGTTTCAATCAGAAGCAGGTGGCGTTCTTGAGCGTGGCCAAGGATTTGGGTGACAACGTTGGTCTTCTTGCCGGCAAATTCAGCCAGCTCTACCCCATTTCCACTCTCATTCTTATTGGAGTCTTCCAGAATGTTCTTGGTTATGGCCTCGTTTGGCTTGTCGTCACGCATCGCCTTCCCGCTTTTCCTCTTTGGCTGCTATGTATTCTAATCTTTGTGGGACAAAATGGATCAACATATTACAACACAGCTGCACTGGTTTCCAGCGTGCAAAGTTTCCCCGAGAGCAGAGGCCACGTGGTGGGGATTTTGAAGGGCTTCGTTGGCCTAAGCGGTGCAATCTGGACTCAAATCATAGCCATGATGAATCTCCCTGATCAAGCCTCTCTCATTTTCATCATTGCAGTTGGACCTGCAATGGTTTCATTAGCCCTGATCTTCATCATCAAACCCGTTCACACTTATCAACAATCTAGAGCCTCTGATGAATCAGGTTTCATGTTCATCTACAGCATTTGCCTTCTCTTGGCTGCTTACATGACGGGAGTTTTGTTGCTAGAAAACATGCTTCATTTGGACCAAACCATCATCTCAATGTTTGCACTCATTCTCATCATTCTCATATTGCTTCCAATCATAGTTCCCATTCTATTGGTTTTCTTCTCTGGACCTCAGAGTGCTGACCAAGAAGCCCTCTTGGAACCACCACTGCTACAAGCGACAAAGTCTAAGAATGTGATTGGGGAGAGTAGTAGTACTGCCAGAGTAACCAAACACGTTGAAAATGAGAAGAGCATTCCCCCGAACCTAGAGGTGCTTCCTCTGTCCGAAGGGCCAAGGGACATGTTTCAGATTCAAGCTAGGCTTTGGCAAGCTCTGACCAACGCTTTGAGGAAAATCAAGCTAAAAAATGGGCCCCGTAGAGGAGAGGATTTCACCTTGTCACAAGCAATGGCCCAGGCTGACTTTTGGGTGATGTTTTTCTCTCTAGTCATGGGCGCTGGGTCGGGCTTGACAATCATAAATAACATGGGCCAGATATGTCAATCATTGGGAGACAACAACGTCAATGTCTATGTCTCAGTTATCAGCATATCCAACTTCCTTGGTCGTGTTGGTGGTGGCTACTTCTCAGAGGTTATAGTAAGAAATTTTGGGTATCCGAGACTTATAGCATTGGCAGTGATTCAAGCGATGATGTCTTTGGGACTCTTCTACTACGTGGTGGGATTGGTTGGACAAGTTTATGTGGTGGGGATATTGAACGGCTTTGGGTACGGTGCTCACTGGTCAATTGCTCTAGCAGCAGCTTCAGAACTATTTGGCGTGAAAAACTTTGGAACTTTGTACAATTTTCTGACTATGGCTAGCCCAGCAGGGTCTCTCTTCTTGTCTGGATTTGTGGCAAGCACAATATATGACTACTATGCAGAGCAGCAGGCAAAGCACCGAATGATGCAAACTTTTGAAGCCTCCAACTTGGCAATTTCTTACCACGTCATAGCAAATAACAGTGAGGTGCTTCTTTGCGAGGGAAACATTTGCTTCTCCCTCACTTGTGGAATATTGGCACTGGTTTGCTTGTTTGCAGCTTCTTTGAGCTTGGTCATCGCTCACAGAACAAGAAGGTTCTATGCACAACTTTATGAGGAGTCTCGAAGGTAA 1803 0.4631 MVRVHEKVKEFVRHRWVVFVCAMWDMSFAGTSYMFGSISPVIKSSMGFNQKQVAFLSVAKDLGDNVGLLAGKFSQLYPISTLILIGVFQNVLGYGLVWLVVTHRLPAFPLWLLCILIFVGQNGSTYYNTAALVSSVQSFPESRGHVVGILKGFVGLSGAIWTQIIAMMNLPDQASLIFIIAVGPAMVSLALIFIIKPVHTYQQSRASDESGFMFIYSICLLLAAYMTGVLLLENMLHLDQTIISMFALILIILILLPIIVPILLVFFSGPQSADQEALLEPPLLQATKSKNVIGESSSTARVTKHVENEKSIPPNLEVLPLSEGPRDMFQIQARLWQALTNALRKIKLKNGPRRGEDFTLSQAMAQADFWVMFFSLVMGAGSGLTIINNMGQICQSLGDNNVNVYVSVISISNFLGRVGGGYFSEVIVRNFGYPRLIALAVIQAMMSLGLFYYVVGLVGQVYVVGILNGFGYGAHWSIALAAASELFGVKNFGTLYNFLTMASPAGSLFLSGFVASTIYDYYAEQQAKHRMMQTFEASNLAISYHVIANNSEVLLCEGNICFSLTCGILALVCLFAASLSLVIAHRTRRFYAQLYEESRR 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2377g00005 600 Gene3D MFS general substrate transporter like domains 8 203 IPR036259 -
Vium2377g00005 600 SUPERFAMILY MFS general substrate transporter 7 589 IPR036259 -
Vium2377g00005 600 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 592 - -
Vium2377g00005 600 CDD MFS_Mch1p_like 14 577 - -
Vium2377g00005 600 Pfam Nodulin-like 15 262 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2377g00005 Vium-Chr2377 55528 58919 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2377g00005 5 599 Nodulin-like Gene Family AT5G14120 47.731 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2377g00005 - - vun:114196253 1060.06