Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2368g00029 ATGGCATCCAACAGGGGTCAAGGTGGAATTCAACAGTTGCTGGCAGCTGAACAAGAAGCACAAAGGATTGTCAATGCTGCCAAAAATGAAAAATTAGCCAGACTGAAGCAGGCCAAAGAAAACGCTGAAAAGGAAATTGCTGAGTACAGAGCTCAGTTGGAGTACGAGTTTCAAAAGAAAGTGTCAGAGAGTAGTGGACATTCTGGTGCTAATGTAAAGAGACTTGAGCTAGACACTGGAGCAAAGATCCATCACCTGAAAACTGAGGCAGGGAGGATATCAGGGGACGTTGTCACCACGCTCCTCAAGTATGTAACTAGTGTGAAGAATTAA 333 0.4444 MASNRGQGGIQQLLAAEQEAQRIVNAAKNEKLARLKQAKENAEKEIAEYRAQLEYEFQKKVSESSGHSGANVKRLELDTGAKIHHLKTEAGRISGDVVTTLLKYVTSVKN 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2368g00029 110 FunFam V-type proton ATPase subunit G 3 110 - -
Vium2368g00029 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vium2368g00029 110 Coils Coil 10 59 - -
Vium2368g00029 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vium2368g00029 110 Gene3D - 1 110 - -
Vium2368g00029 110 NCBIfam V-type ATPase subunit G 3 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2368g00029 Vium-Chr2368 182801 184553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2368g00029 1 110 Primary Pumps ATPases(2) AT3G01390 71.818 1.14e-41 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2368g00029 K02152 - gmx:100305477 182.956