LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium2368g00012	ATGGCAACACCCAGTTATTCTTTACAACACACTCCAACATGGGCTATTGCCCTTGTTTCCTTCATTCTTATCTCAATCTCGATCATCTTGGAGCATTTCATCCATCTCATAATCAAATGGCTGAGGAAACATAGAAAGAGCGATTTGGTGGAAGCAATAGAGAGGCTTAAATCAGAGCTGATGATCTTAGGATTCATGTCGCTGTTGTTGACAGTAACTCAAGATGCTATAATAGAAATCTGCATTCCAGTGAGGGCTGCAGATACTATGCTTCCATGTCGAAAACGTACTACCAATGATACTGCAATTTTGGATTCTTGCAGTGCCAAAAATGTATGAATATATATATGCTTAATTACTTTTCTACATGAGAAAATTTTTTGACTGTTGATCAGTGTTAACTCTGTTTATACGCAGACTAGTGAGGTTGCTTTAGTGTCAAAACATGGAATCCATCAACTTCATATGTTCATTTTTGTTCTAGCTGTCATGCAAATCGTGTACAGTATTCTCACCGTTTCTCTGGCAAGGGCTAAGATAAGGCACTGGAAAGCTTGGGATGAAGAGACTCAAACAATGGAATATGAAATTGCCAACGACCCTAATAGATTCAGATACACAAGGCAAACAACATTCGGAAGACGCCACATATCTACTACTACCGCATCACCAGTGTCTGTTTGGATTAAATGTTTTTTCAGACAGTTCTTTCATTCAGTAGAAAAAGTTGATTACCTCACCTTGAGGCATGGTTTCATATCAGCTCACTTTTCAGCTAGAAACAGCAACTTCGACTTCCAAAAGTACATTGAACAGTCACTTGAGGAAGATTTCAGAATCATAGTGAGCATTAGCCCTGTGATGTGGTTCACTGTTGTTATTTTTCTGCTCGTGGATGTACATGGCTGGCATGTATATCTCTGGTTATCCTATATTCCCCTCTTGCTGGTTCTGGTTGTAGGAGCTAAACTTGAAGTCATTGTAGACGAAATGGCTCTTCAGATGAAAGATGTCAACAGTGTAACCAAAGGGACCCCACTTGTTTCTCCAAGTGATGAATTTTTCTGGTTTGGCCATCCAGGATTTGTGTTAACACTTCTGCATTACACTTTATTTGTGAATGCATTCGAGCTTGCCTTCTTTATATGGGTATCGACACAGTTTGGAATAAATTCTTGCTACCACGAACATAGAACATTTACAGTCATAAGGGTGGTGATAGCGGTGGCAGTTCAAGTCCTATGCAGCTATGTAACTCTTCCCCTCTATGCACTAGTGGCACAGATGGGGTCACAGGTGAAGAGCAAAGCCTTGGCTAAGATTCTGAGGCAGTGGCATGTTGAGGTGAGGGAGAGAAGGAGGAAGCAACAGAAACTTGTGAAGTCTTTTAGTTTTAGCCATATGTCTTCAGAATGGAACCAAGGAAATAAGAGTGCCCTTGAGTTTTCTTCAGGGCTACGTGAAAACACTCGTTCCTCTAGTGAAGGAGAAATTGTACAAGAGTTGGAGCATCCCATGAAAACACAGGCAAACTCATCAAGTGATCCACCTCCTGGTGTTGTCTAA	1566	0.408	MATPSYSLQHTPTWAIALVSFILISISIILEHFIHLIIKWLRKHRKSDLVEAIERLKSELMILGFMSLLLTVTQDAIIEICIPVRAADTMLPCRKRTTNDTAILDSCSAKNVXIYICLITFLHEKIFXLLISVNSVYXTQTSEVALVSKHGIHQLHMFIFVLAVMQIVYSILTVSLARAKIRHWKAWDEETQTMEYEIANDPNRFRYTRQTTFGRRHISTTTASPVSVWIKCFFRQFFHSVEKVDYLTLRHGFISAHFSARNSNFDFQKYIEQSLEEDFRIIVSISPVMWFTVVIFLLVDVHGWHVYLWLSYIPLLLVLVVGAKLEVIVDEMALQMKDVNSVTKGTPLVSPSDEFFWFGHPGFVLTLLHYTLFVNAFELAFFIWVSTQFGINSCYHEHRTFTVIRVVIAVAVQVLCSYVTLPLYALVAQMGSQVKSKALAKILRQWHVEVRERRRKQQKLVKSFSFSHMSSEWNQGNKSALEFSSGLRENTRSSSEGEIVQELEHPMKTQANSSSDPPPGVV	522

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium2368g00012	522	MobiDBLite	consensus disorder prediction	484	522	-	-
	Vium2368g00012	522	Pfam	Mlo family	7	471	IPR004326	GO:0006952\|GO:0016020
	Vium2368g00012	522	PANTHER	MLO-LIKE PROTEIN 1	7	501	IPR004326	GO:0006952\|GO:0016020
	Vium2368g00012	522	MobiDBLite	consensus disorder prediction	506	522	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium2368g00012	Vium-Chr2368	50577	58687	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vium2368g00012	7	510	MLO family	AT3G45290	47.741	7.19e-168	483