Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2366g00002 ATGGCTTCATCGATCACAGCAACGATTCTAAGATATGTAATTTTATGTCATGCCCAATACTTGTGTTGTTTCAACAACTTTGCTTTGAATCTTTCAAATGTCAAAGAAGAATTGGAATTGACTCGAGACAGAGTGAAGGAGCAAATTAGAGAAGCCATCAATAAAGTTGAAAAAGTTGAGTCAACTGATGTGAAGTGGCTGAAAGATGTTAAAAAAGTCTTAGAAGAAGTGCAAGTGCTAGAAAAAAGAATAATGAGTGTGAACAAAAGCTATTTCAGAAGGCAATGTCAATATTCTCTTGCAAAAGAAATAGAAAAAAAAACAATTGAAATGATTGATTTTAATAGCGAGTATACACAGTTTTCGAGGATTACTAAACTTCTAGGCATGGAGTACTTTTCTTCCAATGATTTCTCTATGTTAAACCCTATAAAAGCATCTTACAAGAAGCTTCTAGAAGCATTAATGAATAAAAGTGCTTCCATAATTGGATTAGTTAGATTAGGAGGCTCAGGGAAAACTACTTTGGCAAAAGAAGTGTGCAAAAAAGCTGAAGACATGAAACTCTTTGAGAAAGTTGTCTTCGCAAGAGTGTCTCGACTTCCAAATATAAGAAGTATCCAAGATCAGATTGCTGATCAATTGACTTTTGAGTTAAAGGAAGGATCGGAAATAGGTAGAGCACAAAGACTATCAGAAAGATTAAGGAAAGGTACAACTCTTGTAATCTTGGATGATGTATGGGAAAGACTGAACTTTGAAGCTTTAGGTATTCCACTTGATGAAAGTAGTAAGGCTTGTTGCGTATTGATAACTACTCGAAGTAAAGAAGTATGCCCTTCTATGAAATGCCAAAGTATAATTGAACTTAATCTTTTGACTCACGAGGAAGCTTGGACTTTGTTCAAACATTATGCAAACATAAATGATGACTCCTCAGCAGCTTTGAAAGGTGTGGCAAGAAAAATTGTAATAAAAATTGATAATGAATGTAAGGGATTTCCCATTGCAATTGTGACTCTGGGAAGCACGCTAAAGGATAAAACTATTGCAAATTTTGAATCAGCATTATCAAGACTAGAAAGTTCTAAGCCACTAGATATTCCAAAAGACTTAACAAGTCCTTATGTTTGTCTTGAATTAAGTTACAATAATTTGACAAACCAATTAGCTCAATCCTTATTATTGTTGTGTTCTATGTTTCCAGAGGATTGTGAAATAATTTTGGAAGATTTGTTTCGATTTGGAAGGGCATTTGACACAATTGGAACGTTTGAAACGATGGGGAACGCAAGGAGAGAGATGGATGCAGCTATTGACGTGCTCAAGAACTGTTTTTTGTTAATGCATGCAAAAGAAAAACTCAAGGTAAAAATGGACAATTTGGTTCGTGATGTAGCGTTGTGGATTGCGTTTAAAACTGGTAAAGCAATTTTCACACGTACTAAAGTGGACCCAAGAGCTTTGGCAGATGATGAAACCCTGAAAGATATGAAAGCAATAGCCATATGGGGTTTGAAAAGTTATGATGTTCTCAACTATAAAATAAATTGTCCAATACTTGAAATTCTTGTGCTTTCTTTCAATGTGAGTGGTGACGTAAAAGTATTAGATGGGTGTCTTCAAAGCTTGGAAAAACTTAAAACCTTATCAATCTTAAATTTAGATGAGTGGGATAGAGGTATTTTTCCTTTGCCAGAATCAGTGAAGTCATTGAAAATTATTCAAACACTGTGCTTGAGGGGTTATGATTTAGGTGACATATCTGTTGTGGAACAACTGCAAGCACTTGAGATTCTTGACTTACGTGGTTGTTCTTTTGATGATTTGCCTGTTGGGATTGTGGGATTAAAAAAGTTGAAACTTTTGGATTTGTACAAATGTGTGATTAAAAAAAATACAATTGTTGAAGCTTACAAAGTGTTAGGGAAATGCTTGCAGATAGAGGAATTGTATCTGTATTTGAGCAATTATGTAATGGACTTTCAACATGAAGTCTCTTACTCAAAATTACAGAGGCATGCTATAATAAACACTGACTATTATTATCATGGTTATGACTTTGAGGATAATACAATTATGAAAAAATATGCACAGTCTAGAAGTTTATTAATAGAGAGGGAGGGTTTAAACCTTGATATTACTACTCAAAATCTTATATCATTACCAATCAAGGATCTCTTTATAAGAGCAGAGTACCTTTGTTTGAGAAACCTGAGAGGAGATTATAAAAATATAATCCCATCAATGGATCAACAAGGCATGAATCAGTTGATTGCCCTAGTACTTGAACATTGTTCAAAGATAGAATGTCTTATTGATAACACTATAAATACTAGCACCAGTGTTGATTTTCGTCAAACTGAAGATGTATTCTCTACCCTTGTTTACTTAAGTTTGAGAGGTTTACATAACCTTCAAGAAATGTTTTGTGATCCCTGTTATCGATGTTCTCTCCAAAATTTAGAAGAGCTCTTGATAGAAGATTGTAGTAAATTCAACAACATATCCTTTCCCAAGAGCTCAAACCTATGCAATCTCAAGATCCTTTCAATATCTAAATGTCCAGTGTTAACTTATCTCTTCATGCCATCCATTGTACAAACTCTATCGTTGTTAGAGATTCTAAAAATATCTTCCTGTAGTGCATTGAGGCACATAATAGAAGAAGTGGAAGAAGAAAATTATGTACTTGCAAGCACTAAGAGACTCCAAAAATTAAGGATTCTTGAGATTGAAGATTGCAACAATTTGGAATATATTTTCACTATGATTTTGGTCCGAGGGCTAGTAAGTTTGGAAAGTGTGAGAATTGCTAGCAACATGAAATTGAAGTATGTATTTGGCAGTGAAAAAGAACATAATCTTGCAATGTATCAAAGTTTCCGTCAACAAACTCTAAATTTGCTCAATTTGGGCACTCTAAATTTGATCAAATTAACAAATCTGATAAACATTTGGCCTGAATATTGTCATCCACATCTCTCAAATCTTGAAAAGTTACATTGCACTTATTGTCCAGAACTGTCTGATTTATCTAAGGTGATGACGGTTTCAGATCTCGGCCAACTTACAACTTCAATGAAGACTGAAATACTATGCCTGATTACCAACATATTTCAACCTCAACTCAAAGCTTTCCTCAAATGTAGAGAGCTTTGGTTGAGAGCTGTTAGAATGAAAGGTATCTTCCAATTCCAAATGGGAGAACAAAGGGGAACTACAGAACTCATTCTCCTAAACTTGGATATAAATTATCTAAGATTGGAGAATCTACCTGAGCTGAACTTCATATGGAAGGGTCCCATAGGTTTTCTAAACCTCCAAAAGCTTTATGATATTCGTGTGGATGGATGTCCAAAATTGAAAACCATATTCTCCACCACAGTTGTTACAAGCTTACCACGACTAACATATCTAAGTATAATTAATTGTGATGAATTGGAACAAATATTTGATTCAGAGTGCTCTAAGTTACATAAAGCTTTTGGTTTTGAACATGAACTTGATGATCGTGGTTTAAGAATGGATAAGGATGGAAAACAAGTACTATTACAGAACTTGAAAAGTACACAACTCATAAATTTGCCAAACTTCGAAGAGATTCACCACGGATTTAAGTTGAAAGAAGATGTTGAACAAACAATAAAGGAATGTCCTATGTATTCTCCAAGTTTATATCTACAACCAGGTAAAATTCATGTCTTTTTTTCCAGACACAATTACAATGTCTTTGGATTATTATGA 3747 0.3419 MASSITATILRYVILCHAQYLCCFNNFALNLSNVKEELELTRDRVKEQIREAINKVEKVESTDVKWLKDVKKVLEEVQVLEKRIMSVNKSYFRRQCQYSLAKEIEKKXTIEMIDFNSEYTQFSRITKLLGMEYFSSNDFSMLNPIKASYKKLLEALMNKSASIIGLVRLGGSGKTTLAKEVCKKAEDMKLFEKVVFARVSRLPNIRSIQDQIADQLTFELKEGSEIGRAQRLSERLRKGTTLVILDDVWERLNFEALGIPLDESSKACCVLITTRSKEVCPSMKCQSIIELNLLTHEEAWTLFKHYANINDDSSAALKGVARKIVIKIDNECKGFPIAIVTLGSTLKDKTIANFESALSRLESSKPLDIPKDLTSPYVCLELSYNNLTNQLAQSLLLLCSMFPEDCEIILEDLFRFGRAFDTIGTFETMGNARREMDAAIDVLKNCFLLMHAKEKLKVKMDNLVRDVALWIAFKTGKAIFTRTKVDPRALADDETLKDMKAIAIWGLKSYDVLNYKINCPILEILVLSFNVSGDVKVLDGCLQSLEKLKTLSILNLDEWDRGIFPLPESVKSLKIIQTLCLRGYDLGDISVVEQLQALEILDLRGCSFDDLPVGIVGLKKLKLLDLYKCVIKKNTIVEAYKVLGKCLQIEELYLYLSNYVMDFQHEVSYSKLQRHAIINTDYYYHGYDFEDNTIMKKYAQSRSLLIEREGLNLDITTQNLISLPIKDLFIRAEYLCLRNLRGDYKNIIPSMDQQGMNQLIALVLEHCSKIECLIDNTINTSTSVDFRQTEDVFSTLVYLSLRGLHNLQEMFCDPCYRCSLQNLEELLIEDCSKFNNISFPKSSNLCNLKILSISKCPVLTYLFMPSIVQTLSLLEILKISSCSALRHIIEEVEEENYVLASTKRLQKLRILEIEDCNNLEYIFTMILVRGLVSLESVRIASNMKLKYVFGSEKEHNLAMYQSFRQQTLNLLNLGTLNLIKLTNLINIWPEYCHPHLSNLEKLHCTYCPELSDLSKVMTVSDLGQLTTSMKTEILCLITNIFQPQLKAFLKCRELWLRAVRMKGIFQFQMGEQRGTTELILLNLDINYLRLENLPELNFIWKGPIGFLNLQKLYDIRVDGCPKLKTIFSTTVVTSLPRLTYLSIINCDELEQIFDSECSKLHKAFGFEHELDDRGLRXMDKDGKQVLLQNLKSTQLINLPNFEEIHHGFKLKEDVEQTIKECPMYSPSLYLQPGKIHVFFSRHNYNVFGLL 1250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2366g00002 1250 Coils Coil 28 62 - -
Vium2366g00002 1250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 396 IPR027417 -
Vium2366g00002 1250 Gene3D - 293 386 IPR042197 -
Vium2366g00002 1250 SUPERFAMILY L domain-like 460 1160 - -
Vium2366g00002 1250 Gene3D Ribonuclease Inhibitor 959 1224 IPR032675 -
Vium2366g00002 1250 FunFam Probable disease resistance protein At1g61300 135 287 - -
Vium2366g00002 1250 Gene3D Ribonuclease Inhibitor 478 680 IPR032675 -
Vium2366g00002 1250 Pfam NB-ARC domain 148 385 IPR002182 GO:0043531
Vium2366g00002 1250 Coils Coil 70 90 - -
Vium2366g00002 1250 PRINTS Disease resistance protein signature 332 346 - -
Vium2366g00002 1250 PRINTS Disease resistance protein signature 163 178 - -
Vium2366g00002 1250 PRINTS Disease resistance protein signature 903 919 - -
Vium2366g00002 1250 PRINTS Disease resistance protein signature 235 249 - -
Vium2366g00002 1250 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1085 1223 - -
Vium2366g00002 1250 Gene3D - 139 290 IPR027417 -
Vium2366g00002 1250 Gene3D Ribonuclease Inhibitor 690 952 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2366g00002 Vium-Chr2366 65372 76146 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2366g00002 149 485 WRKY Transcription Factor Family AT5G45050 27.221 5.23e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2366g00002 - - vra:106778921 1475.3