Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2351g00002 AATGCAATCAGGTACACAGCGTTAGTGGACAATGTGATGCAAGCGGCAAAGGACATGGAGAAAGTTCTTGATGTAAGACTGAGCATGATCGCAGAGGAATACCCTTTGCCACCAATCCCACATCCCTACCCTCTCTTTTCAAGGGAGTTCTTCCGCCGCCATGGTCGTGACCTCTTTGCATGTTCTTCAACATGGTTCCTCGTCGACATTGTCTTCTACAGCCAAGTTTTGTTCCAAAGTGAAATATACAAACGCTACCTCGACGAAAAGGGAAAAGTAGACATCTATAAGGAGGCTATTCACGTCTCTTGGATCCAAGCCGTTATCACAGTCTGTTCCACCATCCCCGGTTACTTCTTCTCTGTCTACTTCATTGACAGATGGGGAAGGGTCAAAATCCAAATGATGGGTTTTTTCTTCATGGCAGTCATCTTTTTCATCATTGGAATTCCCTATTACACTTTTTGGACTACTCCGGACCATGAGGAGAACAAATGGTTCATGGTTTTGTATGGCCTTGCTTTTTTCTTTGCCAACTTTGGCCCTAACACTACCACTTTCATAGTCCCGGCTGCTTTTCCAGCCAGGTTTAGGTCAACTTGTCATGGCATTTCTGGGGCAGCCGGGAAGGTTGGGGCGATCATTGGGTCTGTGGGCTTTCTCTGGGCTTCTCATAACAAGAGGGAGTATGGATACAGTAAGGGAATTGGGATGCAGGTTACCCTTATCATACTTGGAGGAGTGCTTATTGGAATGGTGATCACGTACTTTTTCACTAGGGAAACCATGGGAAGGTCCTTGGAAGAGAATGAGGTTGATAGTCAGACCAATGAAGTTGAAGAACATAATAATCTTTGA 858 0.4522 NAIRYTALVDNVMQAAKDMEKVLDVRLSMIAEEYPLPPIPHPYPLFSREFFRRHGRDLFACSSTWFLVDIVFYSQVLFQSEIYKRYLDEKGKVDIYKEAIHVSWIQAVITVCSTIPGYFFSVYFIDRWGRVKIQMMGFFFMAVIFFIIGIPYYTFWTTPDHEENKWFMVLYGLAFFFANFGPNTTTFIVPAEXFPARFRSTCHGISGAAGKVGAIIGSVGFLWASHNKREYGYSKGIGMQVTLIILGGVXLIGMVITYFFTRETMGRSLEENEVDSQTNEVEEHNNL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2351g00002 287 Coils Coil 267 287 - -
Vium2351g00002 287 Gene3D MFS general substrate transporter like domains 36 287 IPR036259 -
Vium2351g00002 287 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 4 271 - -
Vium2351g00002 287 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 265 IPR020846 GO:0022857
Vium2351g00002 287 SUPERFAMILY MFS general substrate transporter 37 273 IPR036259 -
Vium2351g00002 287 Pfam Sugar (and other) transporter 104 273 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2351g00002 Vium-Chr2351 25304 26364 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2351g00002 4 273 Inorganic Solute Cotransporters AT1G76430 58.845 2.34e-110 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2351g00002 K08176 - gmx:100797683 480.715