Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium234g00034 ATGGCTCTTTCTGCCTCTCTGCTTCAACTTCAACCCTCTTCACAAAAGAAGAAAACTGCTGTTTCCAGAAGTTGGGTTCTGCTCGACCACCATGGCAAACCCACTGTGCTCGATGCAGACAAGCATGCCATCATGCGCCTCGTTAAAATTCACGCCAGGGATCTTCGGATTCTCGATCCTCTCTTATCCTATCCCTCCACCATTTTCGGAAGAGACAAAGTCATTGTTCTCAATCTAGAGCACATTAAAGCTATCATCACTGCAGATGAGGTGTTGCTGAGAGACCCAACGGATGATGACGTTGTGCCAATTGTTGAAGAGCTTCGACGACGGTTACCCAAAGTAAGTGCTTCTGGGGAAGGCCGAGGAGAAGAAGAGACCTGTGCTCAAGATGGTGAAGGAGGAGACGAAAATGAATTTCCATTTGAGATACGGGCTTTGGAAGTTTTATTTGAGGCAATTTGTAGTTTCCTTGACGCACGAACGAGAGAGTTAGAGACTGCTGCTTATCCAGCTTTGGACGAACTTACCTCTAAGATTAGCAGTCGTAATTTGGATAGAGTGAGAAAATTGAAATGTGCAATGACGAGGCTGACCAGTCGTGTTCAAAAGATTAGAGATGAACTAGAAAACCTACTTGATGATGACGACGACATGGCTGATCTTTACTTATCAAGAAAGTCGACGGTTTCATCATCTCCAACAAGTAGCTCTGATGCTCCCAAGTGGCTTTATGGTTCTCCAAATACAGGTTCAAGAATACACAAATCAAGCAGAGCAAGTGGAACAACAGTTCAAAGGGAGGATGATGTTGAGGAGCTTGAAATGTTACTTGAGGCCAATTTCATGCAAATTGACGGCACATTAAATAAATTGGCCACTTTGCGAGAATACATCGATGACACAGAAGATTACATCAACATACAGCTTGACAATCACCGAAACCAGCTGATTCAGCTGGAGCTCTTCATCAGTGCCGGCACTGTGTGTATGTCCTTATATTCATTGGTGGCTGCAATATTTGGTATGAACATTCCATACACATGGAAATCACCAGGCCACGAACATGTGTTTAAATGGGTGGTGATCTTTGCGGGAATGGTTTGTGCATCCTTGTTTTTATCCATAGTATCTTATGCCCGACGCAAAGGCCTTGTCGGGTCTTGA 1167 0.4422 MALSASLLQLQPSSQKKKTAVSRSWVLLDHHGKPTVLDADKHAIMRLVKIHARDLRILDPLLSYPSTIFGRDKVIVLNLEHIKAIITADEVLLRDPTDDDVVPIVEELRRRLPKVSASGEGRGEEETCAQDGEGGDENEFPFEIRALEVLFEAICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKLKCAMTRLTSRVQKIRDELENLLDDDDDMADLYLSRKSTVSSSPTSSSDAPKWLYGSPNTGSRIHKSSRASGTTVQREDDVEELEMLLEANFMQIDGTLNKLATLREYIDDTEDYINIQLDNHRNQLIQLELFISAGTVCMSLYSLVAAIFGMNIPYTWKSPGHEHVFKWVVIFAGMVCASLFLSIVSYARRKGLVGS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium234g00034 388 MobiDBLite consensus disorder prediction 227 261 - -
Vium234g00034 388 Gene3D Magnesium transport protein CorA, transmembrane region 104 317 - -
Vium234g00034 388 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 14 386 IPR039204 -
Vium234g00034 388 FunFam Magnesium transporter MRS2-1 13 96 - -
Vium234g00034 388 Coils Coil 188 215 - -
Vium234g00034 388 MobiDBLite consensus disorder prediction 115 129 - -
Vium234g00034 388 CDD Mrs2_Mfm1p-like 25 385 IPR039204 -
Vium234g00034 388 MobiDBLite consensus disorder prediction 227 264 - -
Vium234g00034 388 MobiDBLite consensus disorder prediction 115 136 - -
Vium234g00034 388 Gene3D - 6 96 - -
Vium234g00034 388 Pfam CorA-like Mg2+ transporter protein 277 374 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium234g00034 Vium-Chr234 400870 404893 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium234g00034 1 361 MRS2 Gene Family AT5G64560 70.190 3.12e-157 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium234g00034 K16075 - gmx:100799368 659.833