Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium234g00028 ATGATTGAGATTCTTCAGAATATGCAGCTGATAGCTCCTCTCTTCCTCGTCCTCTCCCTCATCCTTCCCCTCGTCTTCTTCTTCTACTCCTCACTTTTCAACAACAAAGACCCTGCTCCAACCAAACAAACCGTTACTATCCCAAAATCATACCCACTCATTGGCTCCTACCTTGCCCTCAAACGCATCGGCAACCGCCGTATTCAGTGGCTATCCGATGTAGTCCAAATCTCACCCGCCAACACATTCACCTTCCGTCGCCCACTGGGCCGCCTCCAAGTTTTCACTGGAAACCCCGCCACCGTGGAGTACATTCTCAAGACCCGCTTCTCCAACTACCAAAAGGGCTATTCCTTCATCAGCGCCCTCTCCGATTTCCTCGGCACCGGAATCTTCAACGCCGACGGAAACACGTGGAAGTTCCAAAGGCAAGTCGCCAGCCACGAATTCAACACAAAGTCTCTCCGCAAGTTCGTTGAACACGTTGTGGATGCCGAACTCTCCGACCGCCTCATCCCCATCATGGCTTCAGCGGCACAGCAAGACCAGACCCTCGATTTCCAAGACATCCTCCAACGCTTCGCCTTCGATAACATCTGCAAAATCGCCTTTGGCTTCGACGCGGAGTACCTGACGTCGTCAGCTGAACGGAGCAAGTTCGCGGTGGCGTACGAAGAAGCGACGGAGATAAGCAGCAAACGGTTCCGCGAACTGTCTCCGTTAGTGTGGAAAGTGAAGAGGGCACTGAACATAGGTTCCGAAAAGCGGTTGCGAATGGCTGTGAAGGAAGTGCACGAGTTCGCGAAGAATATAGTGAGAGAGAAGAAGAGGGAGTTGAAGGAGAAGGAATCCCTTGAATCTGTAGACATGCTTTCGCGGTTCTTGAGTTCGGGGCACTCTGATGAAGACTTTGTGACGGACATAGTCATAAGCTTCATATTGGCGGGGAAGGATACCACGTCAGCAGCGCTGACCTGGTTTTTCTGGCTGCTATCGAAGTACCCTCGAGTGGAGAAGGAGATTGTGAAGGAGATAATGGAGAAATCGGAGGCTCCGGTCTACGATGAAGTGAAGCACATGGTTTACACGCATGCAGCGTTATGCGAGAGCATGAGGCTGTACCCGCCAGTGCCCATGGACACCAAGGAAGCAGTGGAGGACGACGTCTTGCCGGATGGGACGGTGGTGAAGAAGGGGACGCTGGTGACTTATCACGTGTACGCCATGGGGAGGTTGGAGAGTATTTGGGGTGAGGATTGGGCAGAGTTTAAGCCAGAGAGGTGGTTGCAGAAGGTTGAATCCGGAAACTGGAAGTTTGTGCCAAAAGATTCTTTCACATATCCTGTGTTTCAAGCTGGTCCCAGAATGTGTTTGGGGAAGGATATGGCTTTTATGCAGATGCAGAGTGTGGTGGCTGGGATTCTTCGGCGGTTCGCGGTTGTTCCCACGGTGGCTGAAGGGGTGGAGCCAAACTTCATTTCCTTCCTGTCCTCCCAGATGGAAGGTGGTTTTCCTGTGAAGATCATTGAGAGGGAAACCTCAAATTAA 1548 0.5194 MIEILQNMQLIAPLFLVLSLILPLVFFFYSSLFNNKDPAPTKQTVTIPKSYPLIGSYLALKRIGNRRIQWLSDVVQISPANTFTFRRPLGRLQVFTGNPATVEYILKTRFSNYQKGYSFISALSDFLGTGIFNADGNTWKFQRQVASHEFNTKSLRKFVEHVVDAELSDRLIPIMASAAQQDQTLDFQDILQRFAFDNICKIAFGFDAEYLTSSAERSKFAVAYEEATEISSKRFRELSPLVWKVKRALNIGSEKRLRMAVKEVHEFAKNIVREKKRELKEKESLESVDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLSKYPRVEKEIVKEIMEKSEAPVYDEVKHMVYTHAALCESMRLYPPVPMDTKEAVEDDVLPDGTVVKKGTLVTYHVYAMGRLESIWGEDWAEFKPERWLQKVESGNWKFVPKDSFTYPVFQAGPRMCLGKDMAFMQMQSVVAGILRRFAVVPTVAEGVEPNFISFLSSQMEGGFPVKIIERETSN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium234g00028 515 Coils Coil 265 288 - -
Vium234g00028 515 Gene3D Cytochrome P450 32 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00028 515 CDD CYP86A 82 504 - -
Vium234g00028 515 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00028 515 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00028 515 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00028 515 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00028 515 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00028 515 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00028 515 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00028 515 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00028 515 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00028 515 PANTHER CYTOCHROME P450 32 506 - -
Vium234g00028 515 Pfam Cytochrome P450 48 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00028 515 SUPERFAMILY Cytochrome P450 48 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium234g00028 Vium-Chr234 331806 333624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium234g00028 8 515 Cytochrome P450 AT5G63450 45.914 1.45e-153 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium234g00028 K20769 K13407 gmx:100818199 820.461