Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium234g00027 ATGATTGCGATTCCCCTGAATCTGGAGCTGATAGCTCCTCTCTTCCTCTTCCTCTCCCTCATCCTTCCCCTCGTCTTCTTCTTCTACTCCTCACTTTTCAACAACAAAGGGGCTGCTCCAACCAAACAAACCGTTACTATCCCAAAATCATACCCACTCATTGGCTCCTACTTTGCTCTCAAACGCACCGGAAATCGCCGTATCCAGTGGCTATCTGATATAGTCCAAATCTCGCCCGCCAACACATTCACCTTCCACCGCCCACTGGGCCGCCTCCAAGTCTTCACTGGAAACCCTGCCAACGTCGAGCACATTCTCAAGACCCGCTTCTCCAACTATCAAAAGGGCTATTCCGTCACTAGCACCCTCTCCGACTTCCTCGGCACGGGGATATTCAACACCGACGGCAACACGTGGAAGTTCCAAAGGCAAGTCGCCAGCCACGAATTCAACACAAAGTCTCTCCGTAAGTTCGTTGAACACGTGGTGGACGCCGAACTCTCCGACCGCCTCATCCCCATCATGGCTTCAGCGGCACAGCAAGACCAGACCCTCGATTTCCAAGACATCCTCCAACGCTTCGCCTTCGATAACATCTGCAAAATCGCCTTTGGCTTCGACGCGGAGTACCTGACGTCGTCAGCTGAACGGAGCAAGTTCGCGGTGGCGTACGAAGAAGCGATTGAGATAAGCAGCAAACGGTTCCGCGAACTGTCTCCGTTAGTGTGGAAAGTGAAGAGGGCACTGAACATCGGTTCCGAAAAGCGGTGTCGAATGGCTGTGAGGGAAGTGCACGAGTTCGCTAAGAACATAGTGAGAGAGAAGAAGAGGGAGTTGAAGGAGAAGGAATCCCTTGAATCTGTAGACATGCTTTCGCGGTTCTTGAGTTCGGGGCACTCTGATGAAGACTTTGTGACGGACATAGTCATAAGCTTCATATTGGCGGGGAAGGATACCACGTCAGCAGCGCTGACCTGGTTTTTCTGGCTGCTATCGAAGTACCCTCGAGTGGAGAAGGAGATTGTGAAGGAGATAATGGAGAAATCGGAGGCTCCGGTCTACGATGAAGTGAAGCATATGGTTTACACGCATGCAGCGTTATGCGAGAGCATGAGGCTGTACCCGCCTGTGCCCATGGACACCAAGGAAGCAGTGGAGGACGACGTCTTGCCGGATGGGACGGTGGTGAAGAAGGGGTCGCTGGTGACTTATCACGTGTACGCCATGGGGAGGTTGGAGAGTATTTGGGGTGAAGATTGGGCGGAGTTTAAGCCAGAGAGGTGGTTGCAGAAGGTTGAATCCGGAAACTGGAAGTTTGTGCCAAAAGATTCTTTCACATATCCTGTGTTTCAAGCTGGTCCCAGAATGTGTTTGGGGAAGGATATGGCTTTTATGCAGATGCAGAGTGTGGTGGCTGCTATTCTGCGGCGGTTCGCGGTTGTTCCCACGGTGGCTGAAGGGGTGGAGCTCAACTTCATTTCCTTCCTCTCCGCCCAGATGGAAGGTGGTTTTCCTGTGAAGATCATTGAGAAGGAAACCTCAAACTAA 1548 0.5207 MIAIPLNLELIAPLFLFLSLILPLVFFFYSSLFNNKGAAPTKQTVTIPKSYPLIGSYFALKRTGNRRIQWLSDIVQISPANTFTFHRPLGRLQVFTGNPANVEHILKTRFSNYQKGYSVTSTLSDFLGTGIFNTDGNTWKFQRQVASHEFNTKSLRKFVEHVVDAELSDRLIPIMASAAQQDQTLDFQDILQRFAFDNICKIAFGFDAEYLTSSAERSKFAVAYEEAIEISSKRFRELSPLVWKVKRALNIGSEKRCRMAVREVHEFAKNIVREKKRELKEKESLESVDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLSKYPRVEKEIVKEIMEKSEAPVYDEVKHMVYTHAALCESMRLYPPVPMDTKEAVEDDVLPDGTVVKKGSLVTYHVYAMGRLESIWGEDWAEFKPERWLQKVESGNWKFVPKDSFTYPVFQAGPRMCLGKDMAFMQMQSVVAAILRRFAVVPTVAEGVELNFISFLSAQMEGGFPVKIIEKETSN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium234g00027 515 PANTHER CYTOCHROME P450 32 506 - -
Vium234g00027 515 Coils Coil 265 288 - -
Vium234g00027 515 CDD CYP86A 82 504 - -
Vium234g00027 515 Gene3D Cytochrome P450 32 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00027 515 Pfam Cytochrome P450 49 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00027 515 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00027 515 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00027 515 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00027 515 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00027 515 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00027 515 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00027 515 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00027 515 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00027 515 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium234g00027 515 SUPERFAMILY Cytochrome P450 48 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium234g00027 Vium-Chr234 317870 319625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium234g00027 14 515 Cytochrome P450 AT5G63450 46.245 3.11e-153 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium234g00027 K20769 K13407 gmx:100817669 803.127