Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium234g00002 ATGGCAAAGGAGCAAATTCAGGTACTAAATGCGCTTGATGTTGCAAAAACGCAATGGTATCATTTCACAGCAATCGTCATCGCTGGAATGGGTTTCTTCACCGATGCATATGATCTATTCTGCATATCCCTTGTAACAAAGTTGCTTGGCCGCATATATTACCATGTTGACGGTGCATCAAAGCCCGGTACATTGCCTCCCAATGTTGCAGCTGCAGTAAATGGTGTGGCTTTCTGTGGAACACTTTCAGGTCAGCTTTTCTTTGGTTGGCTTGGTGATAAGATGGGAAGGAAAAGAGTGTATGGCATGACTCTGATGATGATGGTGATATGTTCCGTCGGTTCCGGCCTTTCATTCGGTCATAGTGCAAAATCTGTAATGGCAACTCTCTGTTTCTTCCGGTTCTGGCTTGGATTTGGCATTGGTGGAGACTATCCACTTTCTGCTACCATAATGTCTGAGTATTCTAACAAGAAGACTCGCGGGGCCTTCATTGCTGCAGTGTTTGCCATGCAGGGTTTTGGCATTTTGGCAGGTGGTATATTTGCAATTATAGTTTCAGCTGCATTCAATAGCAGGTATACTGCTCCAGCATATGAGGTTGATCCAGCCGGGTCAACAGTCGTACAAGCAGACTACATTTGGAGGATAATTGTGATGGTCGGAGCACTCCCAGCGGCATTGACTTACTACTGGCGGATGAAGATGCCGGAAACTGCCCGTTATACTGCTCTAGTAGCCAAGAACATGAAGCAGGCAGCAGCAGATATGTCTAAGGTTCTGCAGGTTGAGATTCAAGCTGAACCACAGAGTGAAGATCCGGCAAAGCCCAAGCCATATGGCTTGTTCTCAAAGGAGTTCCTCACTCGTCATGGACTGCATCTGCTTGGTACATCAAGCACTTGGTTCTTACTTGATATTGCATTTTACAGTCAAAATCTTTTCCAGAAGGACATCTTCAGTGCAATTGGTTGGATACCTCCAGCCAAAACCATGAATGCTATTGAGGAGGTTTACAAAATTGCAAGGGCTCAAACACTCATTGCTCTGTGCAGTACAGTTCCTGGCTACTGGTTCACGGTGGCTTTCATTGACAGGATAGGAAGATTTGCTATCCAATTGATGGGCTTCTTCTTCATGACTGTCTTCATGTTTGCTCTTGCCATCCCATATGACCACTGGACTCATAAGGATAACCGGATAGGATTTGTGGTGATGTATTCATTGACCTTTTTCTTTGCAAACTTTGGGCCCAATGCTACCACTTTTGTGGTGCCAGCAGAGATTTTCCCTGCTAGATTCCGAAGTACTTGTCATGGAATTTCATCAGCATCTGGAAAGCTTGGGGCTATAGTTGGTTCCTTTGGATTCTTGTACTTGGCACAAAACAAGGACAAAAGCAAAGCTGATGCAGGGTACCCTGCAGGTATTGGTGTAAAGAATTCACTTATAGTCTTAGGTGTAGTTAACGTTCTTGGCTTCTTCTGCACTTTCTTGGTTCCTGAGGCAAAGGGAAGGTCGTTGGAGGAGATGTCAGGTGAGAATGAAGAGGATGTTGGGACCGGTGAAGAATCAGAACAATCACATTCTCACAACAGCAACAACAAAACTGTTCCGTATGTTTAG 1626 0.449 MAKEQIQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGASKPGTLPPNVAAAVNGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMMMVICSVGSGLSFGHSAKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIVSAAFNSRYTAPAYEVDPAGSTVVQADYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNMKQAAADMSKVLQVEIQAEPQSEDPAKPKPYGLFSKEFLTRHGLHLLGTSSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVAFIDRIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKDNRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAIVGSFGFLYLAQNKDKSKADAGYPAGIGVKNSLIVLGVVNVLGFFCTFLVPEAKGRSLEEMSGENEEDVGTGEESEQSHSHNSNNKTVPYV 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium234g00002 541 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 505 IPR020846 GO:0022857
Vium234g00002 541 MobiDBLite consensus disorder prediction 507 541 - -
Vium234g00002 541 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 503 - -
Vium234g00002 541 CDD MFS_PhT 25 504 - -
Vium234g00002 541 MobiDBLite consensus disorder prediction 526 541 - -
Vium234g00002 541 Gene3D MFS general substrate transporter like domains 20 529 IPR036259 -
Vium234g00002 541 SUPERFAMILY MFS general substrate transporter 12 512 IPR036259 -
Vium234g00002 541 Pfam Sugar (and other) transporter 25 512 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vium234g00002 541 NCBIfam phosphate:H+ symporter 11 514 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vium234g00002 541 FunFam Inorganic phosphate transporter 1-6 20 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium234g00002 Vium-Chr234 16273 19590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium234g00002 1 518 Inorganic Solute Cotransporters AT3G54700 84.008 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium234g00002 K08176 - gmx:100819445 996.497