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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vium2346g00003
ATGGAGACTCCGGTTGAAGGGAAACCTACTCGTCTTGCATCGGGGTTCTCAGATAACTTGTCTGAGACTTGCAAGATGGGTACTCCAAATGGAAGAGGAATTCACAAGTCTGATGATGAAATTCCTTTTGACTCCGACATAAATTATCACTCGGCTGAATCTAGTCTGGTGGAGGTACTTGGATCACATTCTGGAGAATCTCTGACTGTTCATCATGAAACGTTGGCTGGTATTGTTTATAGGAGCATACAAGTTGTGATTTTCTCTAACAAACTCAACTTGCTTATGCCTTTTGGGCCTGTTGCAATTCTTGTGCAGAAGTTGACTGCTCATCTTGGTTGGGTCTTTGCTCTGAGTTTGTTGGGTATAATGCCTCTGGCGGAGCGGCAGCTGGCATTTTACAGTGGAGATACTGTTGGGGGTCTTTTAAATGCTACATTTGGAAATGCAACAGAATTGATCATCTCAATATATGCACTGAAAAGTGGAATGACACGGGTTGTTCAGCTCTCTTTGCTGGGATCAATTTTGTCCAATATGTTACTAGTTCTTGGATGTGCATTCCTATGCGGTGGGATTGTTAATCATAAGAAAGAACAAGTGTTTAACAAGGCAACTGCTTCTGTGAATTCAGGATTACTGTTGATGGCAGTCATGGGCATACTTTTTCCAGCTGTTCTACACTACACACATACCGAGGTTCATGTTGGGAAGTCAGAGTTGTCCCTTTCAAGATTCAGCAGCTGTGTCATGCTTGTGGCCTATGCTGCATACCTGTTTTTTCAGTTAAAAAGTCAAAGAAGTCTCTATCTCTCTGTGAACGAGGAAGAGGGTCAGAGTGGAAACAACTCAAATGACGATGAATCACCAGATATTTCGAAATGGGAATCAATAATATGGCTTTCCGTTATGACTGCTTGGATATCAATCTTGTCTGAATACCTGGTTGGCGCTATAGAGGGAGCATCTACTGCATGGGAAATTCCAATTGCATTTATCAGTGTCATATTGCTTCCGCTAGTGGGGAATGCGGCTGAGCATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGACATTTCCATAGGGGTTGCAATAGGCTCATCCACACAGATATCTATGTTTGTGATACCATTTTGTGTTGTTATTGGCTGGATAATGGGGCATTCTATGGACTTGAACTTTCAACTATTTGAAACTGCAGCACTATTTCTTACTGTTATAGTTGTAGCCTTCATGTTGCAGGAAGGAACTGCTAATTACTTCAAAGGATTGATGCTTATTCTTTGCTATCTGATTGTGGCAGCCAGTTTTTATGTACATATAGATTCCTCTGAATAG
1344
0.4144
METPVEGKPTRLASGFSDNLSETCKMGTPNGRGIHKSDDEIPFDSDINYHSAESSLVEVLGSHSGESLTVHHETLAGIVYRSIQVVIFSNKLNLLMPFGPVAILVQKLTAHLGWVFALSLLGIMPLAERQLAFYSGDTVGGLLNATFGNATELIISIYALKSGMTRVVQLSLLGSILSNMLLVLGCAFLCGGIVNHKKEQVFNKATASVNSGLLLMAVMGILFPAVLHYTHTEVHVGKSELSLSRFSSCVMLVAYAAYLFFQLKSQRSLYLSVNEEEGQSGNNSNDDESPDISKWESIIWLSVMTAWISILSEYLVGAIEGASTAWEIPIAFISVILLPLVGNAAEHASAIMFAMKDKLDISIGVAIGSSTQISMFVIPFCVVIGWIMGHSMDLNFQLFETAALFLTVIVVAFMLQEGTANYFKGLMLILCYLIVAASFYVHIDSSE
447
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vium2346g00003
447
MobiDBLite
consensus disorder prediction
1
20
-
-
Vium2346g00003
447
NCBIfam
calcium/proton exchanger
98
440
IPR004798
GO:0006816|GO:0015369
Vium2346g00003
447
NCBIfam
calcium/proton exchanger
82
439
-
-
Vium2346g00003
447
PANTHER
VACUOLAR CALCIUM ION TRANSPORTER
65
444
IPR004713
GO:0006812|GO:0008324|GO:0016020
Vium2346g00003
447
Coils
Coil
445
447
-
-
Vium2346g00003
447
Gene3D
-
134
277
IPR044880
-
Vium2346g00003
447
Gene3D
-
283
441
IPR044880
-
Vium2346g00003
447
FunFam
Vacuolar cation/proton exchanger
137
276
-
-
Vium2346g00003
447
Pfam
Sodium/calcium exchanger protein
130
263
IPR004837
GO:0016020|GO:0055085
Vium2346g00003
447
Pfam
Sodium/calcium exchanger protein
298
438
IPR004837
GO:0016020|GO:0055085
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vium2346g00003
Vium-Chr2346
20628
25628
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vium2346g00003
44
447
Antiporters
AT1G55730
71.220
0.0
580
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vium2346g00003
K07300
-
gmx:100799276
795.423
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