Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2339g00002 ATGTTTCTTCGTTCTTCGGTTATCGTCGCTGCATCCAAAAGCTTCGCTGCGTCTAGCTTTCTTCTTCCTCTGCATCTCCACGATTGCTATCACTGCTTGTCGCACCTCCCCCTTCGCTACTCGTCGCGCCTCCATGGCAGCGCTCGTCCTGTCTCTGTCGCGTTTGTGACCGCCTCCTTTGTTCCTCCCTTGTTCGTTCATAGTAGTTTGTACCTCCGTCGCAGTCTTACCTTCGTTGTGTCGCGTTCTCCACCACTGCTCCCCTCCCTTGCTTATGTTAAGCAAATCGACGTTGTTCCACCTGTTCAATCTGCGAAGAAGCCTGCCCAGCCTAAGGAATCGAAACCCAAACCTAAGGATGAGCCGAAGAAAGTGGCTAAGCCAGAGCCAAGGAAGCCCAAAGAAGAGGCAGAAGAGGAGGCACCCAAGCCCAAACCCAAAAATCCCCTTGATCTTCTTCCTCCAAGCAAGATGATATTGGATGAGTGGAAAAGACTCTACTCAAACATCAAGACCAACTTCCGCGAGGTTGCAATCAAAAGATTTTGGGACATGTATGATCCAGAGGGTTATTCTCTCTGGTTCTGTGATTACAAATACAACGACGAGAACATTGTTTCCTTTGTGACATTAAACAAGGTAGGTGGTTTTCTTCAGCGGATGGATCTAGCTCGCAAGTATGCTTTTGGAAATATGCTTGTAATTGGATCGCAAGCACCATTTAAGGTGAAGGGGTTGTTGCTTTTCCGCGGGCAAGAGATTCCACAATTTGTGATTGACGAGTGTTATGATATGGAGCTGTACGAGTGGACCAAGGTTGACATCTCTAACGAAACTCAGAAAGAGCAGGTGAATTAGATGATTTAGGATTATGAACCATTTGAGGGAGAGCCTCTTCTCGATGCTAAGTGCTTCAAGTGA 921 0.4734 MFLRSSVIVAASKSFAASSFLLPLHLHDCYHCLSHLPLRYSSRLHGSARPVSVAFVTASFVPPLFVHSSLYLRRSLTFVVSRSPPLLPSLAYVKQIDVVPPVQSAKKPAQPKESKPKPKDEPKKVAKPEPRKPKEEAEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNIKTNFREVAIKRFWDMYDPEGYSLWFCDYKYNDENIVSFVTLNKVGGFLQRMDLARKYAFGNMLVIGSQAPFKVKGLLLFRGQEIPQFVIDECYDMELYEWTKVDISNETQKEQVNXMIXDYEPFEGEPLLDAKCFK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2339g00002 306 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 146 306 IPR036433 GO:0003746|GO:0006414
Vium2339g00002 306 FunFam Elongation factor 1-gamma 1 146 306 - -
Vium2339g00002 306 SUPERFAMILY eEF1-gamma domain 146 306 IPR036433 GO:0003746|GO:0006414
Vium2339g00002 306 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 93 306 IPR044628 GO:0004364
Vium2339g00002 306 SMART EF1G_2 145 253 IPR001662 GO:0003746|GO:0006414
Vium2339g00002 306 MobiDBLite consensus disorder prediction 103 153 - -
Vium2339g00002 306 Pfam Elongation factor 1 gamma, conserved domain 145 253 IPR001662 GO:0003746|GO:0006414
Vium2339g00002 306 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 146 306 IPR001662 GO:0003746|GO:0006414
Vium2339g00002 306 MobiDBLite consensus disorder prediction 110 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2339g00002 Vium-Chr2339 24809 26010 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2339g00002 78 306 Eukaryotic Initiation Factors Gene Family AT1G57720 71.616 1.33e-103 307