Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium2337g00001 | ATGGATGTTCTCAGATTCACCTCAAACCTTAGCACCACTCACATGCTTCCACTCTCCAAAAGACATCAAACACAACATCCTCGTATGAAGTTTTCCGTTTCATGCAGAGCCACGAAACAGCAGACGTGTGTGGAGGAGAACTTGTACAAGGTACTAAGTTTGAGTCCCATGAGTGCGACCACAGATGACATAAAGAAAGCGTACAGATCAATGGCTCTTCAGTTCCACCCCGACGTGTGCCATGACGGTTCCAAGAAAGAAGAGTTGACGAGGATGTTTGTGCAGCTCAACGCCGCCTACACCACCTTGTCCAACCCACAGCTTCGAGCGGATTATGATTATGAGTTGGGTTTGAGAAACAAGAAAAGTGTGGGTGATGAGAGCTGGAGATGTAGGTGGCAGGAGCAGGTGGTTGGGTTGAAGAGAAGGTCTCACACGCGT | 441 | 0.4853 | MDVLRFTSNLSTTHMLPLSKRHQTQHPRMKFSVSCRATKQQTCVEENLYKVLSLSPMSATTDDIKKAYRSMALQFHPDVCHDGSKKEELTRMFVQLNAAYTTLSNPQLRADYDYELGLRNKKSVGDESWRCRWQEQVVGLKRRSHTR | 147 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium2337g00001 | 147 | CDD | DnaJ | 47 | 105 | IPR001623 | - | |
Vium2337g00001 | 147 | PANTHER | CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC | 19 | 147 | - | - | |
Vium2337g00001 | 147 | SMART | dnaj_3 | 46 | 108 | IPR001623 | - | |
Vium2337g00001 | 147 | Gene3D | DnaJ domain | 33 | 137 | IPR036869 | - | |
Vium2337g00001 | 147 | PRINTS | DnaJ domain signature | 88 | 108 | IPR001623 | - | |
Vium2337g00001 | 147 | PRINTS | DnaJ domain signature | 50 | 68 | IPR001623 | - | |
Vium2337g00001 | 147 | PRINTS | DnaJ domain signature | 68 | 83 | IPR001623 | - | |
Vium2337g00001 | 147 | PRINTS | DnaJ domain signature | 141 | 147 | IPR001623 | - | |
Vium2337g00001 | 147 | SUPERFAMILY | Chaperone J-domain | 41 | 112 | IPR036869 | - | |
Vium2337g00001 | 147 | ProSiteProfiles | dnaJ domain profile. | 47 | 116 | IPR001623 | - | |
Vium2337g00001 | 147 | Pfam | DnaJ domain | 47 | 113 | IPR001623 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium2337g00001 | Vium-Chr2337 | 4 | 501 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium2337g00001 | 49 | 113 | C2H2 Transcription Factor Family | AT1G74250 | 43.284 | 1.17e-07 | 47.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium2337g00001 | - | - | vum:124830030 | 303.523 |