Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2330g00004 ATGTCAGGTCTTAGCAATGGCGACGCTGCCTCCGTCAAGAAGCTCCCGTCGGTCAAGTTCACCAAGCTTTTCATCAACGGAGAGTTTGTCGACTCTGTCTCAGGAAAGACATTCGAGAGCATAGATCCAAGAACTGGAGAGGTTATAACAAGGATCAGCGAAGGAGATAAGGAAGACATAGACATTGCTGTTAAAGCAGCACGTCACGCCTTTGACTTTGGTCCTTGGCCTCGCATGTCTGGCGCTGACAGAGCTAAAATACTAATGAAATGGGCGGAACTAATTGATGAACACGCAGAAGAACTTGCAACACTGGATGCCATTGATGCAGGGAAGCTGTATCACATGTGTAAGAATTTGGAAGTTCCAGCAGCCGCAAACACTCTACGTTACTATGCAGGTGCTGCCGACAAGATTCACGGAGAGGTCTTGAAAATGTCTAGAGAGTTCCATGCGTACACATTACTGGAACCAATTGGTGTTGTAGGACACATAACTCCTTGGAATTTTCCCAATTCCATGTTTTATATTAAGGTTGCTCCTTCTTTAGCTGCTGGTTGCACCATGGTCATCAAGCCTGCTGAGCAAACACCCCTCTCTGCTCTGTATAACGCTCATCTTTCTAAGTTGGCTGGAATTCCAGATGGAGTGATCAATGTTGTGACAGGATTTGGCCCAACTGCTGGTGCTGCATTAAGTTCACACATGGATGTTGATAAGGTCAGCTTTACCGGTTCAACCCAAACGGGTCGTGAGATAATGCAGGCTGCAGCTAAGAGTAACTTGAAACAAGTTTCACTTGAATTAGGAGGCAAGTCGCCCCTCATAATTTTCGATGATGCTGATGTAGAAAAGGCTGCTGAGCTTGCTTTGATCGGGATCCTATATAACAAGGGAGAAGTTTGTGTAGCAAGTTCTCGTGTATTTGTGCAAGAAGGGATCTATGATGAATTTGAGAAAAAATTGTTGGAGAAGGCAAAAGCTTGGGTGGTTGGAGATCCTTTTGATCCTAAAGTCCAACAAGGACCACAGGTTGACAAGGAACAGTTCGAGAAGATTCTTTCATACATTGAGCATGGAAAGAGAGAAGGAGCAACGCTTTTAACCGGTGGTAAAACATTGGGCAATAAGGGCTACTTCATTGAGCCAACAATTTTCTCTGATATAAAGGACGATATGCTCATAGCACAAGATGAAATATTTGGCCCTGTGATGGCGTTGAAGAAGTTTAAGAGCATTGAAGAAGCAATTAAGAGTGCGAATAATAGTAAGTATGGGTTAGCAGCAGGCATAGTGACAAAGAATTTGGATACAGCAAATACTGTGTCAAGGTCGATTCGTGCAGGTACCGTTTGGATAAATTGCTACTTTGCCTTTGGTGATGATGTTCCCTTTGGAGGGTACAAGATGAGTGGATTTGGAAAAGATCATGGCTTGGAAGCCCTTCACAAATACTTGCAAGTTAAATCTGTTGTAACACCTCTTTACAATTCTCCTTGGCTTTGA 1506 0.4369 MSGLSNGDAASVKKLPSVKFTKLFINGEFVDSVSGKTFESIDPRTGEVITRISEGDKEDIDIAVKAARHAFDFGPWPRMSGADRAKILMKWAELIDEHAEELATLDAIDAGKLYHMCKNLEVPAAANTLRYYAGAADKIHGEVLKMSREFHAYTLLEPIGVVGHITPWNFPNSMFYIKVAPSLAAGCTMVIKPAEQTPLSALYNAHLSKLAGIPDGVINVVTGFGPTAGAALSSHMDVDKVSFTGSTQTGREIMQAAAKSNLKQVSLELGGKSPLIIFDDADVEKAAELALIGILYNKGEVCVASSRVFVQEGIYDEFEKKLLEKAKAWVVGDPFDPKVQQGPQVDKEQFEKILSYIEHGKREGATLLTGGKTLGNKGYFIEPTIFSDIKDDMLIAQDEIFGPVMALKKFKSIEEAIKSANNSKYGLAAGIVTKNLDTANTVSRSIRAGTVWINCYFAFGDDVPFGGYKMSGFGKDHGLEALHKYLQVKSVVTPLYNSPWL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2330g00004 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Vium2330g00004 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 13 491 - -
Vium2330g00004 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Vium2330g00004 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Vium2330g00004 501 FunFam Aldehyde dehydrogenase, putative 463 489 - -
Vium2330g00004 501 Pfam Aldehyde dehydrogenase family 29 491 IPR015590 GO:0016491
Vium2330g00004 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Vium2330g00004 501 FunFam Aldehyde dehydrogenase3 271 460 - -
Vium2330g00004 501 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 25 288 - -
Vium2330g00004 501 SUPERFAMILY ALDH-like 15 497 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2330g00004 Vium-Chr2330 40256 44868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2330g00004 2 501 Aldehyde Dehydrogenase Gene Family AT3G24503 70.060 0.0 747