Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2321g00003 ATGGGGTTGAGAAGGGGCAAAAGAGTAAATAAGAAAAATGAGTGTCATCCGACAGGTAATCGAGGACCAGGGCGGACCCCACTGGACTGGACAACGAGGTTGAAGATCGCAGCTGGAGCGGCACGAGGCGTGGCATTCATTCACAAACATAAACTCACCCATGGAAACATCAAAGCCACCAATGTTCTTATTGACGTGGCGGGCAACGCGCGCGTCGCGGACTTTGGTCTCTCCATCTTCGCTGGCGCCTCCATTCTAAGATCCAACGGCTACCGGGCGCCAGAGGTATCGGACGGTCGCAAGCAGACACAGATGTCTGACGTGTACTCCTTTGGCGTCTTATTAATAGAGATGCTGACGGGGAAGTGCCCCTCCACCGTGGTGGATCTCCCCAGGTGGGTCCGGTCGGTTGGGAGAGAGGAGTGGACGGCCGAGGTATTCGATTTAGAACTGATGAGCTATAAGGACATTGAGGAGGAGATGGTGGCGCTGCTGCAGATAGCTATCGAGTGCACTGAGACCGAACCTCATCAACGGCTCAAGATGAGCCACGTGGTGAAGATGATTGAGGAATTGCGTCGGGTCCAGATGTTGCCGTGTGATGAAGGGTTGGAATCGCTGTCTGGGTCACTCTCGATCCCTGAAGCAAGTGCAAGTCAATGA 663 0.5415 MGLRRGKRVNKKNECHPTGNRGPGRTPLDWTTRLKIAAGAARGVAFIHKHKLTHGNIKATNVLIDVAGNARVADFGLSIFAGASILRSNGYRAPEVSDGRKQTQMSDVYSFGVLLIEMLTGKCPSTVVDLPRWVRSVGREEWTAEVFDLELMSYKDIEEEMVALLQIAIECTETEPHQRLKMSHVVKMIEELRRVQMLPCDEGLESLSGSLSIPEASASQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2321g00003 220 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 25 194 IPR046959 -
Vium2321g00003 220 ProSiteProfiles Protein kinase domain profile. 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium2321g00003 220 SUPERFAMILY Protein kinase-like (PK-like) 25 190 IPR011009 -
Vium2321g00003 220 Gene3D Transferase(Phosphotransferase) domain 1 18 202 - -
Vium2321g00003 220 MobiDBLite consensus disorder prediction 1 28 - -
Vium2321g00003 220 Pfam Protein kinase domain 35 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2321g00003 Vium-Chr2321 26354 27120 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2321g00003 19 215 Receptor kinase-like Gene Family AT1G68400 66.509 1.68e-90 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vium2321g00003 Pkinase 1.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2321g00003 - - vum:124829966 426.787