Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2317g00002 ATGGGTCTGGGGAGAAAGATAGACCCTGAGCCTGGTAGGTGTAGAAGAACTGATGGTAAGAAATGGAGATGCTCCAAAGAGGCATACCCGGATTCAAAGTACTGTGAGAGGCACATGCACAGAGGGAAAAATCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACACCATCAACAAACACAAATGCTTCAACTCAACAACCAATCTCATCTATCACCAAACTCAATACTCTTTCTCCTCTTGCATCTTCTGAATCACACCAACACCACCCTCCACACTATACCTCCTTTCTCTATCACCACCCTCCATTGTCAAGGTCCTTTGAAGACAACAGTGCTCCCTTGTTTCTTGACACTGGCTCTTGCTCTCAGTCCAACGCAGATTGCAGGAGTAGGTATGCATACGGAGAGAAGGAAGAGGTGGATGAGCACGCTTTCTTCACAGAGCCGTGTGGTATAATGAAAAGCTTTTCTGCTTCCTCTATGGATGATTCTTGGCAACTCACACCTTTGGCCATGAGCTCCTCTTCTTCTTCCACCAAACAGAGGAGTTCCTTTGGCTTGTCCAATGATTATTCTTGCCTGCAACTTCAGAGCCACTCAAAGCAGCACGAGCAACAAGATCAGGGTGGTTGCTACATGCTAGGTGGAGGCCAACTTGGAAAAGAAGAGCCTCAGAAAACCGTTCATCGCTTCTTTGATGAATGGCCCCACAAAGGTAGACAAGGATCTTGGCTCGATTTGGATGACAAATCTTCCACAACCCAACTTTCAATTTCCATTCCCACCTCTTCTCACGATTTTCCAGCCTTCAGTTCCAGAACCCACCATGATGGTTGA 840 0.4631 MGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTPSTNTNASTQQPISSITKLNTLSPLASSESHQHHPPHYTSFLYHHPPLSRSFEDNSAPLFLDTGSCSQSNADCRSRYAYGEKEEVDEHAFFTEPCGIMKSFSASSMDDSWQLTPLAMSSSSSSTKQRSSFGLSNDYSCLQLQSHSKQHEQQDQGGCYMLGGGQLGKEEPQKTVHRFFDEWPHKGRQGSWLDLDDKSSTTQLSISIPTSSHDFPAFSSRTHHDG 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2317g00002 279 ProSiteProfiles WRC domain profile. 8 52 IPR014977 -
Vium2317g00002 279 MobiDBLite consensus disorder prediction 1 20 - -
Vium2317g00002 279 MobiDBLite consensus disorder prediction 257 279 - -
Vium2317g00002 279 MobiDBLite consensus disorder prediction 51 69 - -
Vium2317g00002 279 MobiDBLite consensus disorder prediction 35 69 - -
Vium2317g00002 279 Pfam WRC 9 51 IPR014977 -
Vium2317g00002 279 PANTHER GROWTH-REGULATING FACTOR 5 3 267 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2317g00002 Vium-Chr2317 30215 31691 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2317g00002 1 49 GRF Transcription Factor Family AT2G06200 92.157 7.89e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2317g00002 - - vum:124829938 572.778