Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2313g00008 ATGAAGTTCAATCCTAGGGTTTCCTCTAGCCGGCGCAAGAGCCGCAAGGCCCATTTCACGGCGCCATCAAGCGTCCGCCGTGTGCTGATGAGCGCGCCGCTCTCAACGGATCTACGGTCGAAATACAACGTGCGTTCCATTCCTGTTCGGAAGGATGACGAGGTGCAAGGAGTTAGGGGAACCTACAAGGGTCGCGAGGGCAAGGTGGTGCAGGTCTATCGCCGCAAGTGGGTTATCCACATTGAGCGAATCACTCGCGAGAAGGTGAACGGCTCCACCGTCAATGTCGGCATTCACCCTTCGAAAGTGGTCACGAAGTTGCGAATGGACAAGGACCGTAAATCCTTGCTCGATCGCAAGGCTAAGGGTCGCGCCGCCGCCGACAAGGAAAAGGGTACAAAGTGCTCTGAGGATATCATGCAGACTGTTGATTAG 435 0.5563 MKFNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSTDLRSKYNVRSIPVRKDDEVQGVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIHPSKVXVTKLRMDKDRKSLLDRKAKGRAAADKEKGTKFXSEDIMQTVD 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2313g00008 146 Gene3D - 1 144 IPR014722 -
Vium2313g00008 146 MobiDBLite consensus disorder prediction 116 146 - -
Vium2313g00008 146 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 8 121 IPR005756 GO:0003735|GO:0006412|GO:0015934
Vium2313g00008 146 MobiDBLite consensus disorder prediction 1 20 - -
Vium2313g00008 146 Pfam KOW motif 52 82 IPR005824 -
Vium2313g00008 146 MobiDBLite consensus disorder prediction 116 137 - -
Vium2313g00008 146 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 1 141 IPR005756 GO:0003735|GO:0006412|GO:0015934
Vium2313g00008 146 FunFam 60S ribosomal protein L26 1 144 - -
Vium2313g00008 146 NCBIfam 50S ribosomal protein L24 8 122 IPR005756 GO:0003735|GO:0006412|GO:0015934
Vium2313g00008 146 SUPERFAMILY Translation proteins SH3-like domain 8 125 IPR008991 -
Vium2313g00008 146 CDD KOW_RPL26 52 103 IPR041988 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2313g00008 Vium-Chr2313 58010 58758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2313g00008 1 146 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 86.301 7.91e-92 261