Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2313g00007 ATGAGGGCTTTGAAGCACGCCATTGAGACCATCTACGAGGAAGAACACTCCTTCTCTTCTTCTCCACCGTCCATCTCCTCTTCTCCTCCTTCACTCCACTCCATCGTCAATGCTTGGTCTCTCCATTCCTCCTCTGAACCCAACGTCTTGATAATTGTTCAAGGAACCTGCTTTCGTTTGCACCAGGATCGTATGATATCACAAAGTTCATACCTGAAACAGCACCTGATGGGAGTTTCTAATGTAACAATCTCCCCGCCGTTAAACATAACGGCCGAGACTTTCGCCACGGTGGCTGGTTTCTGTTACACCCATAAAGTCCACTTAACGCCGAGCAACATTGCTGCGATGAGAGTGGCGGCGGAGTTGCTGGGTATGACGGAAGGAGATAATCTATGGGAGGTGACAGAATCGTACTTTGAGAGAGTTGTTGGCGTTGATGCATCGATGGTTATTCGTTCGTGCGTGACTATGCTTCCCGAATCCGAAACGACAGCGTCGCTTGTCAGCAGGTGCATTGAAGCTATGATTTGGAACGGCGACGTTTCGTTTTTGGACAACGTCGTTGAGATGCACGCTCAAGATTTTCGAATGGTGGCGTCTTACTTGAACAAACGGCTGCCCAACCACGGCTTATACAAGATTATTGATCACTATCTTAAGGTACGCCACGTGTCATTATATCATGCAATAGATGGACCCCTTTTAATATTTCTGAGAACTGTGACTTCTGATTTTTTTAGATGA 747 0.4685 MRALKHAIETIYEEEHSFSSSPPSISSSPPSLHSIVNAWSLHSSSEPNVLIIVQGTCFRLHQDRMISQSSYLKQHLMGVSNVTISPPLNITAETFATVAGFCYTHKVHLTPSNIAAMRVAAELLGMTEGDNLWEVTESYFERVVGVDASMVIRSCVTMLPESETTASLVSRCIEAMIWNGDVSFLDNVVEMHAQDFRMVASYLNKRLPNHDXLYKIIDHYLKVRHVSLYHAIDGPLLIFLRTVTSDFFR 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2313g00007 249 Gene3D Potassium Channel Kv1.1; Chain A 38 145 IPR011333 -
Vium2313g00007 249 PANTHER OS12G0117600 PROTEIN 46 203 IPR043454 -
Vium2313g00007 249 ProSiteProfiles BTB domain profile. 47 111 IPR000210 GO:0005515
Vium2313g00007 249 Pfam BTB/POZ domain 45 128 IPR000210 GO:0005515
Vium2313g00007 249 SUPERFAMILY POZ domain 39 128 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2313g00007 Vium-Chr2313 53871 55296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2313g00007 39 180 EF-hand Containing Proteins AT2G47860 31.847 8.02e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vium2313g00007 BTB 0.00023 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2313g00007 - - vum:124829920 476.863