Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2306g00001 ATGAATCACCTACCTCGACTATTCGGCAATAGAAAGAAGCCTCCAAACATGGACCCCAAGAAGAGCAAGACGCGAGGCAAGAAGCATCAGCCCAAGCTCGAGCGCCGCAACGCCGCCAAGCACTTCGAATACGACGCCGGATCGTCGTCTTCTTTGCGAGGTGACTCCGCATCCGTCTCCACGTCGTCTTCCTCGTCGTCTTCGTTATTTACGCGTTCAATGGACTTCTACGGCCACCGGAGCTTCCGAATCGATGGCGTGGAGGGCGAGTTCGACCGGATTTGTCAAAGCCTCGGCCTCTCCGGTCCGGAGGACTTCTCCATTCCGACCGCCGCCTGGGAGGCCATGAAGCTCCGCTCCTCCTCCGACATCCCGTTGCTCCGGAACCACGACGGGAAGGCGTTGGACGAGGAGGCGAAGGAGAAGGAGGAAATTGAAGCGGTTGAGAGCGAGTATGAGGCTAGGGTTTTGGATGAGTGTGTTGTTCCTGCTGAGAGCAGTGGTTGCTGCACCGCTGGCGGCGGAGGAATTAAGGGTTTTCGGCCTCCGATGCTGAAGCCGCCGCCAGGGATTAGGGTTTCGGTGGTGGACGAGACGTGTTCGACATGGGATTTGTTGCGGGATTTTGCGCCGAAAGGGGAGGGAGGGAAGGAGACTTACGTGGAGTTGAGTGCTTCTGATGAAGATGAGGACGGAGAAGTAAAGGAAGAGGAGGATGAGGAAGAAGGGGAAGTTGGTGGAGTGAGGGTGGAGAGAGAAGAGGAGGAAAACGCGGCGAGGATTGCGGATATTGTGGATGAGTTTTCTGGGTTTTCTACTTCGAACGAAGATGATTCTTCTAGCACTACCACGGGTCCTAATTCTAGTAATATATCTCCTAATGGGAGAATCAAGCGTGTGATTACCGCAGGTAACTGGCAGAAGGGTGAGCTTTTGGGGCGTGGTTCGTTTGGCTATGTCTATGAAGGGATTTCTGAGTAA 981 0.5464 MNHLPRLFGNRKKPPNMDPKKSKTRGKKHQPKLERRNAAKHFEYDAGSSSSLRGDSASVSTSSSSSSSLFTRSMDFYGHRSFRIDGVEGEFDRICQSLGLSGPEDFSIPTAAWEAMKLRSSSDIPLLRNHDGKALDEEAKEKEEIEAVESEYEARVLDECVVPAESSGCCTAGGGGIKGFRPPMLKPPPGIRVSVVDETCSTWDLLRDFAPKGEGGKETYVELSASDEDEDGEVKEEEDEEEGEVGGVRVEREEEENAARIADIVDEFSGFSTSNEDDSSSTTTGPNSSNISPNGRIKRVITAGNWQKGELLGRGSFGYVYEGISE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2306g00001 326 MobiDBLite consensus disorder prediction 1 69 - -
Vium2306g00001 326 MobiDBLite consensus disorder prediction 222 296 - -
Vium2306g00001 326 Coils Coil 135 155 - -
Vium2306g00001 326 MobiDBLite consensus disorder prediction 49 69 - -
Vium2306g00001 326 MobiDBLite consensus disorder prediction 245 262 - -
Vium2306g00001 326 MobiDBLite consensus disorder prediction 224 244 - -
Vium2306g00001 326 MobiDBLite consensus disorder prediction 268 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2306g00001 Vium-Chr2306 12476 14115 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2306g00001 32 325 MAP Kinase Kinase Kinase AT4G08500 38.395 7.96e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2306g00001 K13414 - vum:124829898 525.783