Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2303g00036 ATGATGTTGAAATCCTTATGGAAAAGCCTGATAAGCCTTCAACATAAGTGTGTGAAGAAGCAAAAGAGTGAAGTTGATGGAAGTGTGTCAGTGCATGGTGAAGAAAACTCGGTCGTTTTGCCTGTGCAGTGTTGCAACTGTTGCGTAGAAGAAACCAAACAATGCAATTGTGACCATACTCATGTAGCAGAAGACGCAAATGTCCACGCTCAGCGTCATGCTAACTCCAACAGTTCCTTTACTCATGCTGTCATCAACATGGTGGGGATGCTCGTAGGTTTGGGGCAACTATCAACTCCATATGCCGTGGTAAGTGGAGGGTGGGTGTCTGCATTCTTGCTTGTAGGACTAGGTGTGATGTGTGCTTACAGTTCTCACATACTTGGAACATGCCTCAGAAAGAATCCAAAGTTAAGAAGCTTTGTGGATATTGGGAAACATGCGTTTGGATCAAAAGGAAGGTTGGTGGCTGCAACAATCATCTACATGGAAATCTTCATGTCCCTTGTTTCCTACACCATCTCATTACATGATAATTTGATCACAGTCTTTCTGGGGACAAATCTCAAGCACCACTTCCCTAAATTCTCTTCATCTCAGTTCCTAACAGTGGTGGCAGTTCTCATTGCCCTCCCTAGTTTGTGGATCAGAGACCTCTCTTCCATATCTTTCCTTTCAACACTTGGCATTCTCATGTCTCTCCTCATTTTTCTCTGTGTAGCTGCCACTGCACTTTTAGGACATGTCCGAAACAATCATGCCATACCTGTCCTCCAACTCCATAATATTCCATCAGTATCTGGCCTTTACGTCTTTGGCTATGGAGGACACTTTGTTTTCCCCGAATTATACACATCCATGAAAGACCCTTCAAAATTTACCAAGGTTTCTATTGTGAGCTTCGCACTGGTTACAGCAATTTACACGACACTGGGGTTCATGGGTGCGAGGATGTTTGGTAAGGATGTAAAGTCTCAAATAACTCTGAGCATGCCAGCAGAGAGCATTGTGACAAAGGTTGCTCTGTGGGCAACCGTGGTGGCACCAATGACCAAATACGCGCTTGAATTCATACCATTGTCAATTCAACTAGAACATGCTCTTCCAAGCACCATGAGTGGCAGAAACAAGATGATTATTAGGGGTTGCGTGGGTTCATTTTCACTTTTGGTCATACTAACCCTTGCTCTGTCGGTTCCATATTTTGAACATGTACTAAGTCTCACTGGTTCCCTTGTCAGTGTTGCCGTTTGTTTGATTCTGCCATGTTCTTTCTACTTGAAGACATGTTGGGGTCAAATATCAAACCTTGTCTTGCTCCTTAACCTCTTTCTCATCACATTTGGCTTTCTTCTTGCTCTCATGGGCACCATTTCCTCCTCAAAGTTGCTACTCAAAAGTTTTCAATTGCATCACTCAAGTTAA 1425 0.4337 MMLKSLWKSLISLQHKCVKKQKSEVDGSVSVHGEENSVVLPVQCCNCCVEETKQCNCDHTHVAEDANVHAQRHANSNSSFTHAVINMVGMLVGLGQLSTPYAVVSGGWVSAFLLVGLGVMCAYSSHILGTCLRKNPKLRSFVDIGKHAFGSKGRLVAATIIYMEIFMSLVSYTISLHDNLITVFLGTNLKHHFPKFSSSQFLTVVAVLIALPSLWIRDLSSISFLSTLGILMSLLIFLCVAATALLGHVRNNHAIPVLQLHNIPSVSGLYVFGYGGHFVFPELYTSMKDPSKFTKVSIVSFALVTAIYTTLGFMGARMFGKDVKSQITLSMPAESIVTKVALWATVVAPMTKYALEFIPLSIQLEHALPSTMSGRNKMIIRGCVGSFSLLVILTLALSVPYFEHVLSLTGSLVSVAVCLILPCSFYLKTCWGQISNLVLLLNLFLITFGFLLALMGTISSSKLLLKSFQLHHSS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2303g00036 474 PANTHER AMINO ACID TRANSPORTER 71 457 - -
Vium2303g00036 474 Pfam Transmembrane amino acid transporter protein 77 458 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2303g00036 Vium-Chr2303 165327 167659 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2303g00036 45 472 Amino Acid or Auxin Permease AAAP Family AT5G16740 59.907 8.76e-173 490