Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2303g00004 ATGATTCCGACACTCGAAACAATGTTCCAAAGCACCTTCTCTTGGTCCCTCATCACTGGTTTCCTCTCAACGCTACTCGCTGCTCTTGCTATCTCCTTCAACTACTGGCTTGTCCCCGGGGGGTTCGCATGGAGAAAACATCAGAACCGTTACAAACACCATGCAAAACTCTCTGGTCCAATGGGCTGGCCCGTATTAGGGACCCTGCCTGAAATGGGCTCTCTGGCCCATACAAAACTTGCTTCCATGGCCACTTCCCTGAAAGCAAAGAGGCTCATGACACTCAGTTTGGGAACCAACCGAGTTGTTATTAGCAGCCACCCGGAGACCGCGAGAGAAATTCTTTGCGGGTCAGGCTTCTCAGACCGACCCGTTAAAGAATCGGCAAGAACGCTGATGTTTGAGCGAGCCATCGGATTAGCTCCATATGGGACATATTGGCGTCACCTTCGTAAGGTGGCGACCACGCACATGTTCTCTCCGAGGAGGATTTCTGATCTGGAGAGCCTCCGACAGAGAGTGGCGGGTGATATGGTGAGGAAAACGTGGAAGGAGATGGAGATGAAAGGGGTGGTGAAGGTTCGAGGGATATTGCATGAAGCGTCCCTGAGTACCATGTTGGAGAGTGTTTTTGGGATCAATAATAATTGTATAGAATCAGAAAGAGAAAAGATGTTGGGAGATATGATCAAGGAAGGGTACGAGTTGATTTCCACGTTTAACTGGGAAGACTATTTCCCCTTCAGGTTTTTGGACTTTCATGGCGTGAAGAGAAGGTGTCACGGATTGACGACTAAGGTTAAGAGTGTGGTTGGTGAGATTGTGGAAGAAAGAAAAACATGTGAAAAGCTGGTTGGGCAGACTGATTTTCTCAGCGCTTTGTTATCGTTGCCGGAAGAAGAACGAATAGGTGAATCAGATACAGTAGCTATCTTATGGGAAATGTTGTTCCGGGGAACAGACACGGTTGCTATTCTTTTGGAATGGATTATGGCCATGATGGTTGTACACCAAGATGTTCAGATGAAAGCCCGCCAAGAGATTGACACGTGCATTGGCCGGAATAGTCACGTGCGAGACTCTGACATTCCGAATCTCCCTTACCTTCAAGCCGTAGTGAAGGAGGTGCTTCGGTTGCACCCACCGGGCCCATTGCTTTCATGGGCTCGTCTCGCGACCCATGACGTTCACATTGACAAAGTCCTGGTGCCTGCAGGCACAACTGCAATGGTTAACATGTGGGCCATATCACACGACTCATCGATCTGGAAGGACCCATGGGCCTTCAGGCCCGAACGATTCATTGATGAACAAGTGTCCATCATGGGGTCAGACATGAGACTTGCACCGTTTGGTGCGGGACGTAGGGTGTGCCCTGGCAAAACATTGGGCTTAGCCACGGTTCATCTGTGGCTTGCAGAGTTTCTTCACCGATTCATATTGGTTCCGGCGCAACCTGTGGATCTTTCAGAATGCCTTAAGCTCTCTCTGGAAATGAAAAAACCATTACAGTTCAAAGTGATCCCTAGGTACTCTTGA 1539 0.4912 MIPTLETMFQSTFSWSLITGFLSTLLAALAISFNYWLVPGGFAWRKHQNRYKHHAKLSGPMGWPVLGTLPEMGSLAHTKLASMATSLKAKRLMTLSLGTNRVVISSHPETAREILCGSGFSDRPVKESARTLMFERAIGLAPYGTYWRHLRKVATTHMFSPRRISDLESLRQRVAGDMVRKTWKEMEMKGVVKVRGILHEASLSTMLESVFGINNNCIESEREKMLGDMIKEGYELISTFNWEDYFPFRFLDFHGVKRRCHGLTTKVKSVVGEIVEERKTCEKLVGQTDFLSALLSLPEEERIGESDTVAILWEMLFRGTDTVAILLEWIMAMMVVHQDVQMKARQEIDTCIGRNSHVRDSDIPNLPYLQAVVKEVLRLHPPGPLLSWARLATHDVHIDKVLVPAGTTAMVNMWAISHDSSIWKDPWAFRPERFIDEQVSIMGSDMRLAPFGAGRRVCPGKTLGLATVHLWLAEFLHRFILVPAQPVDLSECLKLSLEMKKPLQFKVIPRYS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2303g00004 512 Gene3D Cytochrome P450 43 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2303g00004 512 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2303g00004 512 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2303g00004 512 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2303g00004 512 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2303g00004 512 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2303g00004 512 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2303g00004 512 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2303g00004 512 PANTHER CYTOCHROME P450 78A7-RELATED 16 510 - -
Vium2303g00004 512 SUPERFAMILY Cytochrome P450 59 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2303g00004 512 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2303g00004 512 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2303g00004 512 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2303g00004 512 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2303g00004 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Vium2303g00004 512 FunFam Cytochrome P450 78A5 49 510 - -
Vium2303g00004 512 Pfam Cytochrome P450 59 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2303g00004 Vium-Chr2303 16801 18602 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2303g00004 33 510 Cytochrome P450 AT1G74110 49.901 3.96e-174 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2303g00004 - - ccaj:109797962 844.728