Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2291g00002 ATGGGTGCGAAGAAATGGTTTATGATAATAGTCAAATTGAAGAAATCGAAGAAATCCAAACAAGAAAAGGTACAGTCTACTGATGAAAATTCAGATGAATGTTCAAACGTGAAGCAAAGTGGTCGTGAAGAGTCAAGTGGCATTCCCAATGAAGGTTTGATGATGGATCGGACAGTTCCATCAAGACTGATGGACGATGTGGCAGCTACTAGGATTCAAAATGCATTCCGTTCATTTATGGCAAGAAGAACATTACATCATCTAAGGGGAGCAGTGAAATTCGAAGCTTTAATTCAAGATCACCTAGCCAGAGAGCAAACAGCAACCGCACTGAACTATATACATTCATGGAGCAGAATACAAGAACAAATTAGAGCTCGAAGAATCTGTATGATAACAGAAGCCAGAATTAAGAAAAAGAAATTGGAAAACCAGTTAAAACTTGAGGCTAAGATTCAGGAGCTTGAGGTGGAGTGGTGCAGTGGTTCTGAAACCATGGAAGAGATACTTTGCAGGTTACATCAGCGAGAGGAAGCAGCAATTAAACGAGAACGAGCCATGGCATATGCCTTTTCCCATCAGTGGAGGCCAAACTGTAGCCAGTATTTTGGTCAGGCTTCTTATAGCCTTGGTAAAGAAAGTTGGGGTTGGAGCTGGACAGAGCGTTGGGTCGCGGCACGTCCTTGGGAAGTACAGGTTCGAGTTCAGCCCTCCAAAACAAAGAAACTTAATGGCCATGATCAAAAAATCAAATTCAACAAGATGAACTACAGTGAAAGCAAAGCAGCCTTGGCGAAACCTTCCCTGTTAAACGGGAGGGAAACTGGAAAAGGAAAGGAAAACAGTACTTCAGGGCAGTCAAAGAACATCGTTACCAAATAG 882 0.4229 MGAKKWFMIIVKLKKSKKSKQEKVQSTDENSDECSNVKQSGREESSGIPNEGLMMDRTVPSRLMDDVAATRIQNAFRSFMARRTLHHLRGAVKFEALIQDHLAREQTATALNYIHSWSRIQEQIRARRICMITEARIKKKKLENQLKLEAKIQELEVEWCSGSETMEEILCRLHQREEAAIKRERAMAYAFSHQWRPNCSQYFGQASYSLGKESWGWSWTERWVAARPWEVQVRVQPSKTKKLNGHDQKIKFNKMNYSESKAALAKPSLLNGRETGKGKENSTSGQSKNIVTK 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2291g00002 293 PANTHER IQ-DOMAIN 5-RELATED 1 260 - -
Vium2291g00002 293 ProSiteProfiles IQ motif profile. 65 93 IPR000048 GO:0005515
Vium2291g00002 293 MobiDBLite consensus disorder prediction 275 293 - -
Vium2291g00002 293 Coils Coil 132 158 - -
Vium2291g00002 293 MobiDBLite consensus disorder prediction 20 39 - -
Vium2291g00002 293 MobiDBLite consensus disorder prediction 263 293 - -
Vium2291g00002 293 MobiDBLite consensus disorder prediction 15 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2291g00002 Vium-Chr2291 25288 29010 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2291g00002 1 242 IQD Protein Family AT3G15050 51.429 2.33e-82 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2291g00002 - - gsj:114375165 492.656