Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2287g00006 ATGAGAACTCATATCATAACAAAGTCGTACAAATCAAATTTTGAAAGCAATAAAGATTGTCGGGAGATTGAGAGATTGACCAAGATCATTAAGAGGTTGGTCAATGTTGTTAAGAGGTCGATCAAAACATTAGAGAGGTCAATCAAAGTGAAAGATAGGGCTCACACCATAGGAACAGCTCATTGCAGCTCATTCAGGGATAGGTTTCAACAAGACTCCAAGGGAAAGCTCACACTGATTGACAAAAGCCTTGATAGTAGCTATGCAAATGAGCTAATGAAAGAGTGTCCCTTAAGTGCAAGCCCATCAATGTTAGTAAATAAAGATCCTGAAACTTCCATGGTTTTTGACAACCAGTACTACAGAAATCTTGTCAACAACAAGGGGTTGTTCCAATCTGACTCTGCCTTGCTAAGTGACAACAGAACAAGGAGATTGGTGGAGGACTTGGCAAAAGATCAACAGTTTTTCTTTCAAAGTTGGGGCCAGTCTTTCTTGAAACTCACTACTATTGGAGTCAAAACTGGTGATGAGGGTGAAATTAGGAGCTTCTGTGCATCAACTAATGCATGA 573 0.3979 MRTHIITKSYKSNFESNKDCREIERLTKIIKRLVNVVKRSIKTLERSIKVKDRAHTIGTAHCSSFRDRFQQDSKGKLTLIDKSLDSSYANELMKECPLSASPSMLVNKDPETSMVFDNQYYRNLVNNKGLFQSDSALLSDNRTRRLVEDLAKDQQFFFQSWGQSFLKLTTIGVKTGDEGEIRSFCASTNA 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2287g00006 190 Gene3D Peroxidase, domain 2 54 168 - -
Vium2287g00006 190 PRINTS Plant peroxidase signature 107 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2287g00006 190 PRINTS Plant peroxidase signature 163 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2287g00006 190 PRINTS Plant peroxidase signature 46 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2287g00006 190 PRINTS Plant peroxidase signature 123 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2287g00006 190 Pfam Peroxidase 54 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2287g00006 190 ProSiteProfiles Plant heme peroxidase family profile. 34 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2287g00006 190 Gene3D - 169 189 - -
Vium2287g00006 190 FunFam Peroxidase 48 168 - -
Vium2287g00006 190 PANTHER - 53 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2287g00006 190 SUPERFAMILY Heme-dependent peroxidases 54 189 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2287g00006 Vium-Chr2287 58812 61039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2287g00006 48 189 Peroxidase AT4G31760 58.451 2.91e-56 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2287g00006 K00430 K18328 gmx:100803223 242.662