Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2287g00001 ATGAGAAGTTTTCCCATTCCCACCAACACCAAAACCACCACATTAGCACCAACAACCTCCACAGTACAAACACTGACAACAACGTCAACAAGAACAACATCAACATCAACCTCAACTTCATCACCTCTTGCCTCTCCATGGCACTCTCCTGTTCCTTACCTTTTTGGAGGCTTGGCCATCATCATGGCTCTCATATCCATGGCACTCTTCATACTTGCTTGCTCCTATTGGAGACTCACAAGGAGTACCCAACAAAGGGATTTGGAGAATATGAACACCAACAAAGAGGGTGATGATGACCCTCAAGAAAAGGAACAGCCTTTGGTCTATGAGGAGAAGATCTTGGTCATCATGGCTGGAGATCACAAACCAACCTTCTTGGCCACCCCATCTACCAATACTAATTTCCACAAACACCTCGCAAATTCAGAAAACTTGGAAATTTCCGACAACAAACGTGTTGTTCTTGATGATGATGTTTCAGACAGAAACGGAAGTTCTCGTGAACATAATCAACAACCTAGTCAGTGA 531 0.4388 MRSFPIPTNTKTTTLAPTTSTVQTLTTTSTRTTSTSTSTSSPLASPWHSPVPYLFGGLAIIMALISMALFILACSYWRLTRSTQQRDLENMNTNKEGDDDPQEKEQPLVYEEKILVIMAGDHKPTFLATPSTNTNFHKHLANSENLEISDNKRVVLDDDVSDRNGSSREHNQQPSQ 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2287g00001 176 MobiDBLite consensus disorder prediction 151 176 - -
Vium2287g00001 176 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 28 150 IPR040359 GO:0080143
Vium2287g00001 176 MobiDBLite consensus disorder prediction 151 166 - -
Vium2287g00001 176 MobiDBLite consensus disorder prediction 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2287g00001 Vium-Chr2287 15316 16086 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2287g00001 45 134 Glutamine Dumper (GDU) Family AT4G25760 59.783 8.16e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2287g00001 - - vra:106764355 219.935