Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2285g00008 ATGATGAACATTGCACTTCTTGTTCAACTCTTTGCATTTTCCTTCCTTAGTTGTGTATATGCACAAGACACCACCACCCTTGTGCCTGCCATCGTAACATTTGGTGATTCTGCTGTGGATGTAGGAAATAATGACTATCTTCCCACAATTTATAAGGCTAATTACCCTCCCTATGGGAGAGACTTTGCTAACCACCAACCAACTGGGAGGTTCTGCAATGGCAAATTAGCTACTGATATCACTGCTGAGACGTTGGGTTTTAAGACCTATGCTCCTGCATATCTTAGCCCACAGGCGTCAGGGAAAAACCTCCTTATTGGAGCAAACTTTGCTTCTGCTGCATCTGGTTATGATGAAAATGCTGCTATTTTGAATCATGCAATTCCATTGTCCCAACAGTTAAGTTATTTCAAGGAATACCAAGGCAAGCTGGCCAAGGTAGCTGGCAGTCAAAAGGCAGCCTCAATTATCAAAGATGCATTGTACGTGCTCAGTGCTGGCAGCAGCGACTTTGTGCAAAACTATTACGTCAATCCTTGGATCAACAAAGTATACACACCTGACCAGTATGGCTCCTTCTTAGTTGGTTCGTTCACCAGTTTTGTTAAGGACTTGTATAAATTGGGAGGCAGGAGACTTGGAGTGACTTCACTCCCACCATTGGGTTGCCTACCTGCTGCAAGGACTTTATTTGGTTTCCATGAGAATGGTTGTGTCTCAAGAATCAACTCTGATGCCCAAGCATTTAACAAGAAGATCAACTCAGCTGTAGCAAATCTTCAAAAGCAACTTCCGGGTCTCAAGATTGCTGTTTTTGACATTTACAAGCCTCTCTATGACCTTGTTCAATCCCCTTCAAAATTTGGTTTTGTGGAGGCAAACAGAGGTTGCTGTGGTACCGGGACTGTGGAGACAACATCTTTGTTGTGTAATCAAAAATCACCTGGAACTTGTTCTAATGCCACCCAGTATGTGTTTTGGGATAGTGTCCATCCTTCACAAGCAGCTAACCAAGTTCTAGCTGATTCATTAATTATCCAAGGCATAAGTCTTATCACATAA 1062 0.4275 MMNIALLVQLFAFSFLSCVYAQDTTTLVPAIVTFGDSAVDVGNNDYLPTIYKANYPPYGRDFANHQPTGRFCNGKLATDITAETLGFKTYAPAYLSPQASGKNLLIGANFASAASGYDENAAILNHAIPLSQQLSYFKEYQGKLAKVAGSQKAASIIKDALYVLSAGSSDFVQNYYVNPWINKVYTPDQYGSFLVGSFTSFVKDLYKLGGRRLGVTSLPPLGCLPAARTLFGFHENGCVSRINSDAQAFNKKINSAVANLQKQLPGLKIAVFDIYKPLYDLVQSPSKFGFVEANRGCCGTGTVETTSLLCNQKSPGTCSNATQYVFWDSVHPSQAANQVLADSLIIQGISLIT 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2285g00008 353 Gene3D SGNH hydrolase 20 348 IPR036514 -
Vium2285g00008 353 PANTHER GDSL ESTERASE/LIPASE EXL3 16 344 - -
Vium2285g00008 353 FunFam GDSL esterase/lipase APG 20 349 - -
Vium2285g00008 353 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Vium2285g00008 353 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
Vium2285g00008 353 SUPERFAMILY SGNH hydrolase 31 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2285g00008 Vium-Chr2285 38625 40434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2285g00008 4 345 Pollen Coat Proteome AT1G75910 33.913 2.69e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2285g00008 - - vun:114167332 687.567