Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vium2263g00012 | ATGTCTCTTCTCAGCCGATTCTTCTACAAGCGTCCCCCTGATGGCTTACTCGAATTTGCAGACAGAGTCTATGTATTCGATTCCTGCTTCTCCACCGAAGCCCTCCCAGAGGGAATGTACCAGCTCTACCTCCGCCAAATTCTCTCCGACCTCCACGAAGACTTCCCGGAATCTTCCTTCCTCGCACTCAACTTCCGCGACGGTGACTCACGCAGCCGCTTCTCGCGCCTCCTGTGCGAACTTGACGCCACCGTCATCGACTATCCGAAGCAGTACGAGGGCTGCCCCCTCCTCCCCCTCTCCCTCCTCCACCACTTCCTCCGCCTCTGTGACACCTGCCTCACCGACCCCGCCGCCGTGATCTTGTTCCACTGTGAGCGCGGCGGCTGGCCCCTCCTCGCCTTTCTCCTTGCTGCTTTCCTCGTTTTCCGGAAGGCGCAGAGTGGGGAGCGGAAGATTCTGGAGATGGTTCACAGGGAGGCGCCGAAGGGGCTGCTGCAGCTGCTGTCGGCGCTCAACCCGATGCCGTCGCAGCTGCGTTATGTGCAGTATGTGGCTCGGAGGAACATTGGCGCGGAGTGGCCGCCGCCGGAGAGGGCGCTGTCTCTGGACTGTGTAATACTCAGAGGGGTTCCTGGGTTTGATGGGGGGAATGGGTGCAGGCCGTTGTTTAGGATTTTTGGGAGGAATTTGCTTAGTAAAGGCGGCCTTTCCACGCGGATGATTTATAATATGCATAAGAAGAAGAAGACTTTGAGGCACTACAGACAGGCAGACTGTGATGTGATTAAGATTGATATTCAATGCTTAGTGCAAGGGGATGTGGTGTTGGAGTGCGTGCATTTGGATTTGGATCCGGAGAGGGAGGTGATGATGTTTCGAGTGATGTTCAATACAGCATTCATTCGGTCAAACATTTTGATGCTGAATGCTGAGAACTTGGACATTCTGTGGGATTCGAAGGAGCGGTATCCAAAGGGCTTCCGGGCTGAGGTATTGTTTGGGGAGGTTGAAAACATAAGTCCTCAAAGGGCTCCCACAAGTATTTTAGATGGTGAGGTGAAAGGTGGATTACCCATTGAGGCATTTTCAAGGGTTCAAGAACTTTTCAGTGGTGCAGAATGGATTGACAGTGGTGATTCTGCTGCTGTATGGCTTCTTAAGCAGCTTACAGTCTTAAACGACGCCAAAGAGTTTTCAAGGTTTCAGGGTAGAGGAAGTTGGTATTCATCTCCTGCTGACTCTGAAGAAGAAAATAATGAGTCGAGCACTGCTGATAGTTCAGACGAGGCCTTTGATGTTATTCCCAGGTCTTATGCTGATCCTTCAAAATTATTTACATCTGACACACCTGATTTGGTCCATTTAACTTTTGAAAACAACGGTGGAGATTATGTAAATCTAACTTCAAGAACACCTGATCAGTCACTAACCGATGATGTTTCATTGCCACACCATGCTCTAACTAAGGAAACTTCTCCTTGTTTGTCTCCACCGTCACCTTCACATTTTCCCGCTATTCAACCTCTACCGACACTTCCACCTCAATCATCAATACCTATACAGCCAAGTTTAGCTCCTCCCCATCCTCCCCCACCTCCCCCACCTCCGCATCCATTAGTTCAGGATCTGAACAATGCTTCTACATTGCCTTCACCTCCTCCTCCACCCCCTCTCCCTCCTATAGGTGGGGATGCCAATAGCACTCCTGGTTTACCTCCATCTGTACAAACAAGTTCAGCCCCTCCACCACCTCCTCCTCCCCCACTTGCACTTGGACCTGTACAAACAACTTTAGTCCCACCACCTCCTCCTCCTCCACCACCAGGTACTGAGGGAACAAATTCAGTCCCACCACCTCCGCCTCCACCTCCACCTTCAGGTCCTTTGCGAACAGATTTGGCGCCTCCACCTCCACCACCTCCTCCTCCTCCTCCTCCTTTAGGTCCTATGCAAACAGGTTCAGCCCCACCACCACCACCACCACCACCTCCACCTCCACCTCCTTTAGGATCTGAACAAACAGGTTCAGCTCCACCACCACCACCTCCCCCTCCTCTAGGTCCTGCACAAACAAGTTCAGTTCCACCTCCACCTCCACCTCCACCTCTTTCAGGTCCTACACAATTAGGTTCTTTACCCCCACCACCTCCAGGTCTTGTACAAACAGGTTCTGCTCCACCTCCACCTCCACCTCCTCCTCCTCCAGGTCATGTGCAAACAGGTTCAGCTCCACCTCCACCTCCACCTCCTCCAGGTCCTGTACGAACAGGTTCAGCTCCACCACCACCTCCACCTCCCCCAGGTGCTGTACAAACAGGTTCAGCCCCACCACCACCACCTCCTCCTCCAGGTCCTGTACGAACAGGTTCAACTCCACCACCTCCTCCTCCTCCAGGTCCTGTACGAGCAGGTGCAGGTCCACCACCACCTCCACCTCCTCCAGGTCCTGTACGAACAGGTTCAGCCCCTCCACCACCTCCTCCTCCAGGTCCTATACGAGCAGGTTCAGCTCCATCACCACCACCTCCGCCAAGTGTACAAACAGGTTCAGCTCCACCACCACCACCACCATTGGCACCAAGGCCCCCAGGTGCTCCTCCTCCTCCTCCACCTGGTCGTGGTGCATCTCCAATGCCACCTGCACTTACAGCCACTAGTGTGGCACCACCTCCTGGCAAAGCTTCAACAACAAATGTTGGTAGAGGTCGTGGTACTGGTGTTACTGCCAATGCTCCAAAGAAAACTTTGCTGAAACCCCTACACTGGGTGAAAGTCGCTCGAGCAGCCAAGGGAAGTCTATGGGCTGATTCACAGAAACAGGACAGTGGGACAAGGGCCCCTGAGATAGATATATCAGAACTTGAGACCCTGTTTTCAGCAGCATCTACTTCTGATGGGAGTAGTACTAGAGGAGGAGTTCGGCGTGGTCCTAATATTAACAAGCCGGAGAAAGTACAACTGGTTGACTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATATGCTTAAAGCTGTACTGGCATTGGATTCTTTGGTTCTTGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCAACAAAGGAAGAGATGGAAATGTTAAAGAATTATGCAGGAAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTTATGGAGCTGATGAAGGTTCCGCGTGTGGAATCCAAATTAAGGGTTTTTGCTTTTAAAATCACCTTTTCTTCTCAGGTGAACGATTTGAAGGTAAATTTGAACACAATCAACAATGCAGCCAGAGAGGTGAAAGAATCTGGGAAATTGCGTCAAATAATGCAGACTATTCTTACTCTGGGAAATGCCTTGAATCAAGGAACAGCACGGGGATCAGCTGTTGGATTCAAATTGGATAGCCTTCTTAAATTATCTGACACTCGTGCAAGAAATAATAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCTGAGAAAATGCCAGAACTGCTAGATTTTGATAAGGATCTTGTCCATTTGGAAGCAGCTTCTAAGATTCAACTAAAAGCATTGGCCGAGGAAATGCAAGCTGTGAGTAAAGGTTTAGAGAAAGTTGAGCAAGAACTCGCTGCTTCTGAAAATGATGGTGCCATATCAACAGGATTTCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGATGTGAGGTCCCTTATATCATTGTATTCTGAAGTGGGAAGAAGTGCAGACTCTTTGTCCCAATACTTTGGAGAGGATCCAGCTAGATGTCCCTTTGAACAAGTGACACAAATCCTTGTTGTCTTTGTCAAGATGTTCAACAAGTCAAGGGAGGAGAATGAAAGGCAAGCAGATGCTGAAAAGAAGAAATTAGAGAAAGAAGCCTTGAAGGAAAAGGCCGCAAATAATTCACATTCCAAAAGAGACGTGATTCGGTAG | 3966 | 0.4942 | MSLLSRFFYKRPPDGLLEFADRVYVFDSCFSTEALPEGMYQLYLRQILSDLHEDFPESSFLALNFRDGDSRSRFSRLLCELDATVIDYPKQYEGCPLLPLSLLHHFLRLCDTCLTDPAAVILFHCERGGWPLLAFLLAAFLVFRKAQSGERKILEMVHREAPKGLLQLLSALNPMPSQLRYVQYVARRNIGAEWPPPERALSLDCVILRGVPGFDGGNGCRPLFRIFGRNLLSKGGLSTRMIYNMHKKKKTLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNAENLDILWDSKERYPKGFRAEVLFGEVENISPQRAPTSILDGEVKGGLPIEAFSRVQELFSGAEWIDSGDSAAVWLLKQLTVLNDAKEFSRFQGRGSWYSSPADSEEENNESSTADSSDEAFDVIPRSYADPSKLFTSDTPDLVHLTFENNGGDYVNLTSRTPDQSLTDDVSLPHHALTKETSPCLSPPSPSHFPAIQPLPTLPPQSSIPIQPSLAPPHPPPPPPPPHPLVQDLNNASTLPSPPPPPPLPPIGGDANSTPGLPPSVQTSSAPPPPPPPPLALGPVQTTLVPPPPPPPPPGTEGTNSVPPPPPPPPPSGPLRTDLAPPPPPPPPPPPPLGPMQTGSAPPPPPPPPPPPPPLGSEQTGSAPPPPPPPPLGPAQTSSVPPPPPPPPLSGPTQLGSLPPPPPGLVQTGSAPPPPPPPPPPGHVQTGSAPPPPPPPPGPVRTGSAPPPPPPPPGAVQTGSAPPPPPPPPGPVRTGSTPPPPPPPGPVRAGAGPPPPPPPPGPVRTGSAPPPPPPPGPIRAGSAPSPPPPPSVQTGSAPPPPPPLAPRPPGAPPPPPPGRGASPMPPALTATSVAPPPGKASTTNVGRGRGTGVTANAPKKTLLKPLHWVKVARAAKGSLWADSQKQDSGTRAPEIDISELETLFSAASTSDGSSTRGGVRRGPNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLKAVLALDSLVLDIDQVENLIKFCPTKEEMEMLKNYAGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNDLKVNLNTINNAAREVKESGKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELAASENDGAISTGFRKVLKNFLDIAEADVRSLISLYSEVGRSADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADAEKKKLEKEALKEKAANNSHSKRDVIR | 1321 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vium2263g00012 | 1321 | SMART | PTEN_C2_2 | 196 | 1020 | IPR014020 | - | |
| Vium2263g00012 | 1321 | PANTHER | FORMIN-J | 824 | 1314 | - | - | |
| Vium2263g00012 | 1321 | ProSiteProfiles | C2 tensin-type domain profile. | 198 | 337 | IPR014020 | - | |
| Vium2263g00012 | 1321 | Coils | Coil | 1189 | 1216 | - | - | |
| Vium2263g00012 | 1321 | MobiDBLite | consensus disorder prediction | 549 | 564 | - | - | |
| Vium2263g00012 | 1321 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 198 | 337 | IPR035892 | - | |
| Vium2263g00012 | 1321 | Pfam | Formin Homology 2 Domain | 913 | 1283 | IPR015425 | - | |
| Vium2263g00012 | 1321 | MobiDBLite | consensus disorder prediction | 1287 | 1321 | - | - | |
| Vium2263g00012 | 1321 | FunFam | Formin-like protein | 907 | 1294 | - | - | |
| Vium2263g00012 | 1321 | MobiDBLite | consensus disorder prediction | 961 | 981 | - | - |
Showing 1 to 10 of 26 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vium2263g00012 | - | - | gmx:100809152 | 974.926 |
Showing 1 to 1 of 1 entries