Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium225g00009 ATGCCATCTCAGATCTTTCCCACATCCAACCGTTCTCTTGATTCCGCGGTTTCAACTTCTTCCACGGCATTCGTCCGTCCCAAAGAAGACCAAAATGACCCCTCCGTCAGCCTCCTCGATCACTCCGCCACCCCTTCCTACCGAGACTTGTCCCTCAAGCCGCCCTTGCCGCGGGCCTCCAGCTTCACCTCCTCGCGCACCAAACCCTCCCGCCCTCGCCACTCTTTCAATCAGAAACGCCGCCGCCGTGCCGCCAGCCAGGACTCCTTCCCCAACATCTCCGATCAGACTCACACCTCCACCCGCTCCTCCTTCGGCCGCGATGTCGCAGCCGAGACCTTTCTCTTGACTCGCCTTGGCTTCAAGATGCTCGGATACCTCGGGGTAGGCTATAAATGGATTACACGATTTCTTGCCCTTAGTTGTTATGCACTACTTCTTTTTCCGGGCTTTATTCAAGTTGGATATTACTATTTCTTCTCCAGTCAGATACGCAGAAGCATAGTTTATGGAGATAAACCTCGAAATAGGCTTGACTTGTATTTGCCTAAAAATGGCAGCGGTCCAAAACCAGTTGTTGCTTTTATTACTGGTGGAGCCTGGATTATTGGTTACAAAGCATGGGGTACACTTCTAGGTCAACAGCTATCAGAGAGGGATATTATTGTGGCATGTATTGATTACAGAAATTTTCCCCAGGGAACCATCAGCGATATGATAGCTGATTCTTCTCAAGGCATCGCATTTGTGTGCAACAATATTGCAGAGTATGGAGGTGATCCTAACAGAATTTACCTAATGGGACAATCAGCTGGAGCACATATTGCTGCATGTGTAATAGTGGAGCAGGCAATCAAAGAGGCAGGTGAAGGAGAGAGTACATCTTGGAGTCTTTCCCAGATTAAGACTTATTTTGGTTTATCTGGAGGGTATAATTTATTTAACCTAGTAGATCATTTCCACAGTAGGGGTCTTTATCGGTCCATCTTTCTAAGCATAATGGAAGGGGAGGAATCCCTGAGACGGTTTTCTCCAGAAGTAATGGTTCAAGATCCAAACATTGGAAATGTCAATTCTCTACTACCTCCTGTAGTGCTTTTTCATGGGACTGGGGATTATTCAATACCATCAGATGCCAGTAAATCATTTGCTGAAACTCTTAAAAGAGTTGGAGTGACGGCTGAAGCAATTATGTACGATGGGAAGACTCATACAGATGTGTTTCTACAGGATCCGATGAGAGGTGGAAAAGATGACATGTTTGAAGATTTAGTAGGATATATCCACGCTGGTGATGCTGAGGCCCGTGCCAGAGATGCAGAGGCTCCTCCAAGGAGACGCCTTGTGCCTGAATGCATGTTAAAACTCGCTCATAGCGTTAGTCCATTCTAG 1392 0.4698 MPSQIFPTSNRSLDSAVSTSSTAFVRPKEDQNDPSVSLLDHSATPSYRDLSLKPPLPRASSFTSSRTKPSRPRHSFNQKRRRRAASQDSFPNISDQTHTSTRSSFGRDVAAETFLLTRLGFKMLGYLGVGYKWITRFLALSCYALLLFPGFIQVGYYYFFSSQIRRSIVYGDKPRNRLDLYLPKNGSGPKPVVAFITGGAWIIGYKAWGTLLGQQLSERDIIVACIDYRNFPQGTISDMIADSSQGIAFVCNNIAEYGGDPNRIYLMGQSAGAHIAACVIVEQAIKEAGEGESTSWSLSQIKTYFGLSGGYNLFNLVDHFHSRGLYRSIFLSIMEGEESLRRFSPEVMVQDPNIGNVNSLLPPVVLFHGTGDYSIPSDASKSFAETLKRVGVTAEAIMYDGKTHTDVFLQDPMRGGKDDMFEDLVGYIHAGDAEARARDAEAPPRRRLVPECMLKLAHSVSPF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium225g00009 463 MobiDBLite consensus disorder prediction 87 102 - -
Vium225g00009 463 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 160 412 - -
Vium225g00009 463 MobiDBLite consensus disorder prediction 57 71 - -
Vium225g00009 463 MobiDBLite consensus disorder prediction 1 102 - -
Vium225g00009 463 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 8 414 - -
Vium225g00009 463 Gene3D alpha/beta hydrolase 160 413 IPR029058 -
Vium225g00009 463 SUPERFAMILY alpha/beta-Hydrolases 150 424 IPR029058 -
Vium225g00009 463 MobiDBLite consensus disorder prediction 1 28 - -
Vium225g00009 463 Pfam BD-FAE 178 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium225g00009 Vium-Chr225 75186 83811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium225g00009 1 463 Carbohydrate Esterase AT1G26120 64.742 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium225g00009 K15889 - gmx:100790850 770