Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2239g00003 ATGTTACATGAACTCCTGATTGTATCCGGGTGGCTCTCCAAAGCGTTTTATGTGCTCTTTGATGTGCTTTTGTGTAGAGGGTTTTTGAGTCTTCTTTTGTGGGAAGGAGATGTGTTGTCAAGGAGCGCTTCTCAAAGAAGTACAGAGCATCCAACTTTGGATTCTAAATTGACACTGAAGCGCTTAAATGCGGAGGCGAGGTGCGTCACCAAAGCAAGGAAACTTGGGGTTTGTACTCCTGTGCTGTATGCTGTGGATCCTGTGTTGCACACTTTAACGTTTGAGTATGTCGAGGGCCCTTCAGTCAAGGATATATTTCTTGAATTTGGTTCTCGTGGCCTTGGTGAAGAGGGTCTGGACAACATTGCTACCCAAATTGGTCATGCAATTGGAAAACTGCATGATGGTGGTCTTGTTCATGGTGATTTAACAACATCAAACATGTTGCTCAAGAATGGTACCAATGAGTTGGTTCTTATTGATTTTGGTTTGAGCTTTACTTCAACTCTACCGGAAGATAAAGCAGTTGATTTGTATGTTCTGGAAAGAGCTATTCTGTCAATGCATTCTTCATGTGGGAATGTGATGGATCGGATACTTACTGCATACCGGAAGTCATCAAAACAGTGGTCATCCACATTGAACAAGTTGGCAGAAGTGAGGCAAAGAGGACGAAAGAGGACCATGGTTGGATGA 696 0.4325 MLHELLIVSGWLSKAFYVLFDVLLCRGFLSLLLWEGDVLSRSASQRSTEHPTLDSKLTLKRLNAEARCVTKARKLGVCTPVLYAVDPVLHTLTFEYVEGPSVKDIFLEFGSRGLGEEGLDNIATQIGHAIGKLHDGGLVHGDLTTSNMLLKNGTNELVLIDFGLSFTSTLPEDKAVDLYVLERAILSMHSSCGNVMDRILTAYRKSSKQWSSTLNKLAEVRQRGRKRTMVG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2239g00003 231 Gene3D Phosphorylase Kinase; domain 1 44 97 - -
Vium2239g00003 231 FunFam Protein kinase superfamily protein 112 228 - -
Vium2239g00003 231 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 40 231 IPR022495 GO:0004674
Vium2239g00003 231 NCBIfam KEOPS complex kinase/ATPase Bud32 44 225 IPR022495 GO:0004674
Vium2239g00003 231 Gene3D Transferase(Phosphotransferase) domain 1 114 228 - -
Vium2239g00003 231 Pfam Protein kinase domain 60 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium2239g00003 231 ProSitePatterns Tyrosine protein kinases specific active-site signature. 138 150 IPR008266 GO:0004672|GO:0006468
Vium2239g00003 231 ProSiteProfiles Protein kinase domain profile. 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium2239g00003 231 SUPERFAMILY Protein kinase-like (PK-like) 50 179 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2239g00003 Vium-Chr2239 51373 53167 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vium2239g00003 Pkinase 1.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2239g00003 K08851 - jre:109018511 328.946