Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2229g00010 TCTGCTGCTGCTGTAGCAGCTGCTGCTAGAAGTACATTACGTCCGCCGTCATTACAAACTCTTCTAGAGGATACGTCTGATTCAGTTGCCGCTCCCCACACATCTTCCTCTGGGGGTGAATCTGACGGGAGAAGTAGATCTATTGAGAAAGGTTCAAGAGTTAGGAAGTTGAAACATGATGTCATTGAAGCAGTTAATGAACTAATTCAAGACATATCTACTTGCTATGAACAAATAGCTGAGCAGGCAGTGGAGCACATTCACCACAATGAGGTAATTTTAACGTTAGGCAGCTCAAAAACAGTTTTGGAATTTCTTTATGCTGCGAAGGAAAAGCAAAGATCATTTAAGGTCTTTGTTGCTGAAGGTGCCCCAAGATACCAAGGACATATCCTTGCAAAAGAATTGGCTGCCAGAGGCTTACAGACCACAGTAATTTCTGATTCTGCCGTTTTTGCATTGATTTCCCGAGTGAACATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTTATTGCCCCAGTTGGGTTAAATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCATTTGTTGTACTTGCTGGGAGTCACAAGTTGTGTCCTTTGTATCCACACAATCCTGAAGTCCTTCTTAATGAACTGAGATCCCCGTCTGAGCTACTTGACTTTGGGGAATTCTCAGATTGCATGGACTCTGCAAGCGGTGCTGGTTCTCTTCATGTTGTCAATCCAACCTTTGATTNGGAATGA 762 0.437 SAAAVAAAARSTLRPPSLQTLLEDTSDSVAAPHTSSSGGESDGRSRSIEKGSRVRKLKHDVIEAVNELIQDISTCYEQIAEQAVEHIHHNEVILTLGSSKTVLEFLYAAKEKQRSFKVFVAEGAPRYQGHILAKELAARGLQTTVISDSAVFALISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDSASGAGSLHVVNPTFDXE 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2229g00010 253 FunFam translation initiation factor eIF-2B subunit beta 75 252 - -
Vium2229g00010 253 MobiDBLite consensus disorder prediction 16 50 - -
Vium2229g00010 253 Pfam Initiation factor 2 subunit family 47 251 IPR000649 GO:0044237
Vium2229g00010 253 SUPERFAMILY NagB/RpiA/CoA transferase-like 51 251 IPR037171 -
Vium2229g00010 253 MobiDBLite consensus disorder prediction 16 42 - -
Vium2229g00010 253 Gene3D - 75 252 IPR042529 -
Vium2229g00010 253 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 1 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2229g00010 Vium-Chr2229 62464 66394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2229g00010 10 251 Eukaryotic Initiation Factors Gene Family AT3G07300 81.405 4.63e-142 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2229g00010 K03754 - gmx:100778545 468.388