Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2229g00009 ATGTCGACTGTGTGTGCAATCAGATACCAAGGACATATCCTTGCAAAAGAATTGGCTGCCAGAGGCTTACAGACCACAGTAATTTCTGATTCTGCCGTTTTTGCATTGATTTCCCGAGTGAACATGGTCATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTTATTGCCCCAGTTGGGTTAAATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCATTTGTTGTACTTGCTGGGAGTCACAAGGTCAGTTCTTAA 264 0.447 MSTVCAIRYQGHILAKELAARGLQTTVISDSAVFALISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKVSS 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2229g00009 87 Gene3D - 2 87 IPR042529 -
Vium2229g00009 87 Pfam Initiation factor 2 subunit family 9 86 IPR000649 GO:0044237
Vium2229g00009 87 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 86 IPR037171 -
Vium2229g00009 87 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 5 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2229g00009 Vium-Chr2229 61435 62462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2229g00009 6 85 Eukaryotic Initiation Factors Gene Family AT3G07300 86.250 2.28e-43 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2229g00009 K03754 - vum:124829630 166.777