Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2213g00007 ATGGAGGCTCTCAATGCTGCAGCTTTGACCCCTCTGTCTGTGCTTTCTGATACAAAGACAACTAGAAAACAACCTCCAGTTTCTTCATGCAAAGGTTCAAGCTTTTCCACCTTTACCGACAAGAAACCAACGTTGCTGCAAAGTTGCTTATCAAAAAGTCTTCATGGAGGATTGTTTCTTGCAGCTTCAATTATGAGTGGTGATGTTGCCTCAGCTTTGACGTACGAGGAGGCACTGGGGCAAACTTTGAGTCTCCCCGGTACTGGAGACTTCGATGTGAACGGTTTTGTGGAGAGTGCTACTGGCTTTGCAACTGAGAACCCTGTAATTGTTGCTGGGGGAGTGGCCATTCTGGCACTGCCATTGGTTTTGTCTCAGGTTTTTAAGAAGCCTAAGGCGTGGGGTGTTGAGTCTGCTAAGAATGCATATGCAAAACTTGGGGCTGATGAGAATGCTCAGTTGCTTGATATCAGAGCTCTAGTGGAGATTAGGCAAGTGGGGTTCCCAGATGTTGGGGGTCTGAGGAAGAAGGCAGTGTCGATTGCTTATAAGGGTGATGATAAGCCAGGGTTCCTTAAGAAGCTTGCATTGAAGTTTAAGGAACCACAGAATACCACATTGTTTATTCTGGACAAATTTGATGGGAACTCTGAACTGGTTGCAGAGTTGGTTACTGTTAATGGATTTAAAGCTGCTTATGCAATTAAGGATGGTGCAGAAGGACCGAGAGGATGGAAGAGTAGTGGTCTTCCTTGGTTAGCACCAAAGAAGACATTGAGTTTGGATAATCTCACGGATGCTATAGCTGAAGTAATTGGAGATTCATCTGATGGTGTTGCAGTTACTCTTGGGATTGCTGCAGCAGCTGCTGGACTGAGCCTGTTAGCTTTTTCTGAGATAGAATCAATTCTCCAAGTTGTAGGATCAGCTGCACTTGTTCAATTTGCAAGCAAGAAGCTTTTATTTGCTGAGGTAAGTATGTTTTTCAAAGCAGAATGCAATTGTTTTCCCTCTGTTTTTTGCATATCTGTGCTTCAACTTTGTAAATCCTCCTTCTAA 1059 0.4391 MEALNAAALTPLSVLSDTKTTRKQPPVSSCKGSSFSTFTDKKPTLLQSCLSKSLHGGLFLAASIMSGDVASALTYEEALGQTLSLPGTGDFDVNGFVESATGFATENPVIVAGGVAILALPLVLSQVFKKPKAWGVESAKNAYAKLGADENAQLLDIRALVEIRQVGFPDVGGLRKKAVSIAYKGDDKPGFLKKLALKFKEPQNTTLFILDKFDGNSELVAELVTVNGFKAAYAIKDGAEGPRGWKSSGLPWLAPKKTLSLDNLTDAIAEVIGDSSDGVAVTLGIAAAAAGLSLLAFSEIESILQVVGSAALVQFASKKLLFAEVSMFFKAECNCFPSVFCISVLQLCKSSF 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2213g00007 352 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 324 IPR044240 -
Vium2213g00007 352 Gene3D - 133 263 IPR036873 -
Vium2213g00007 352 ProSiteProfiles Rhodanese domain profile. 148 254 IPR001763 -
Vium2213g00007 352 FunFam Rhodanese-like domain-containing protein 4, chloroplastic 132 263 - -
Vium2213g00007 352 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 136 253 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2213g00007 Vium-Chr2213 68213 71787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2213g00007 1 324 Sulfurtransferasese or Rhodanese AT4G01050 61.329 8.79e-122 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2213g00007 K17525 - gmx:100810796 541.191