Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium220g00004 ATGGCTTATTATGCATCCTACTCTATCATTTTGGTACACCTTTGCACCAGTTTTGTTGTTGCAAGCTTTGGCAATGACTTGATAAGACCCAAGTTCTCATCCATTCTAGTGTTTGGGGATTCAACAGTTGACACAGGCAACAACAACTGCATCAAAACTTTGGCAAAAGGAAATCATTTTCCTTATGGTAAGGATTTCCCTGGTCATGTGCCTACTGGTAGGTTTTCCAATGGAAAATTGGTTCCTGACTTCATTGCCTCAGTGTTGAACCTCAAACACACTGTTCCTCCTTTCCTTCAACCTAACCTATCAGATGAAGATCTTCTAACAGGTGTTAGCTTTGCATCTGGGGGATCAGGTTTTGATGATTTCACCACTGCTTTAACAGGTGCAATACCAATGTCACAACAAATTGAATACTTCAAAGTTTACGTAGGAAGACTCAAGGCCATTGCAGGAGAACATGAAGCTAAACAGATACTTAGAGATTCTCTTGTTATTATCAGTGCAGGAACTAATGACTTTCTCCTCAACTTTTATGACATTTCCACTAGAAAATTGGAGTTCAACATTGATGGATACCAAGATTACGTGCAGAATAGAATTCAGAGATTCATTAAGGAATTGTATGATATTGGATGCAGAAATTTTGCTGTATCTGGGCTTCCTTGTATTGGCTGCATACCTATTCAAATAACAAAGTCAGGAAGAATAAAAGATAGGAAATGTGTAGATGATGAGAATTCAGATGCAAAGCTCTACAATCGAAAATTGACACGGCTATTGCTTAAAATACAAGCAATGCTTCCAGGAAGCAAAGTTGTTTATACAGATATATATCACACATTGATCAACCTTATAAATCAGCCACAAAAATATGGTTTCAAAGAGACGAATAAAGGGTGTTGTGGAACTGGGTTGTTTGAAGTAACTCCATTGTGCAATGAATTCACTTCAACATGTGATGATCCTTCAAAGTATGTATTTTGGGACAGTGTTCATCCAACACAACTTGTCTACCAATATATTGCCAAACACATACAAAGGGAAGTTCTCCCCATGTTTCAATTTCACAGGGATATATAG 1086 0.3766 MAYYASYSIILVHLCTSFVVASFGNDLIRPKFSSILVFGDSTVDTGNNNCIKTLAKGNHFPYGKDFPGHVPTGRFSNGKLVPDFIASVLNLKHTVPPFLQPNLSDEDLLTGVSFASGGSGFDDFTTALTGAIPMSQQIEYFKVYVGRLKAIAGEHEAKQILRDSLVIISAGTNDFLLNFYDISTRKLEFNIDGYQDYVQNRIQRFIKELYDIGCRNFAVSGLPCIGCIPIQITKSGRIKDRKCVDDENSDAKLYNRKLTRLLLKIQAMLPGSKVVYTDIYHTLINLINQPQKYGFKETNKGCCGTGLFEVTPLCNEFTSTCDDPSKYVFWDSVHPTQLVYQYIAKHIQREVLPMFQFHRDI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium220g00004 361 PANTHER GDSL ESTERASE/LIPASE EXL3 19 346 - -
Vium220g00004 361 Gene3D SGNH hydrolase 28 352 IPR036514 -
Vium220g00004 361 FunFam GDSL esterase/lipase APG 26 351 - -
Vium220g00004 361 CDD SGNH_plant_lipase_like 34 347 IPR035669 -
Vium220g00004 361 SUPERFAMILY SGNH hydrolase 34 351 - -
Vium220g00004 361 Pfam GDSL-like Lipase/Acylhydrolase 35 347 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium220g00004 Vium-Chr220 19991 21611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium220g00004 10 351 Pollen Coat Proteome AT1G75910 34.870 4.71e-64 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium220g00004 - - gmx:100817270 593.193