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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vium2201g00002
ATGAAGAGGGAGTGCGAACAGCTTGGTTCCAGCGCAGGGAACTCAAGCTGCGGGTACTCGAGTGACAAATCGAACATTTGGGACGAGGAAGGAGGCATGGACGAACTTCTGGCGGTGGTGGGTTAGAAGGTGAGATCTTTCGACATGGCGGAAATCGTGCAGAAGTTGGAGCGTCTTGAAGAAGCCATGGGAAACATTCAAGACGATCTCAAGGAACTTTCAGATGGCGCCGCGCACTATAACCCCTCTGATATCTCCAATGTCGAGACCATGCTCTGCAATTTCGACTTGCTTCCTCCAGAAGAACCAGATAAGGGCTACCCCTCTTCAGACTAGGATCTCAAGGCTATTCCAGGGAAAGCAATTTACGACAGAGGTGTTAGCACCACGCCAAATGCTAAGCGTCGCAAATCTACCAAGTCAACGCGTGCTTTTCTGGTTGTTGACTCACAGAAGAACGGGATCCTTCACGTGCACAGTCTCATGGCGTGCGCGGAGGCCGTAGAAAACAACAACCTCGTCGTCCCGGAGTCGTTGGTGAAGCAGACCGGATTCCTCGCGGTGGTTGGAGCTATGCAGAAAGTCACCACCTACTTTACGGAAGTGCTCACATGGCGAATCTATCGCATTTTCCCTCTCCAGCACTCAATCCCAGACTCTCTCGAGATTCACTTCTATGAAACCTGTCCTTACACCAAGTTCGCACTCTTCACCGCGAACCAAGCTATTCAGGAAGCGTTCCAAGGGAAGAGCCACGTTCACGTCATAGATTTCGGAATCAACCAGGGGATGCAGTGGCCAACACTGTTGCAGGCTCTCGGCCTTCGTCCCGGCGGTCCTCTCACTTTCCGGCTCATCGGAATCGGGCCTCCAGCAGCGGATAACTCTGACCAACTCCAGGAGGTCGGATGGAAGCTCGCACAGTTGGCAGAGACGATTCACGTGCGGATTGAGTACCACGGCTTTGGCGCCATCGATCCGTTGTCCATAATTCGGTCGGAGATTCTGACAGTGGTGGAGCAAGAATCGAATCATAATGGACTGAGGTTTCTTGACCGCTTCATTGAGTCGCTACACTATTATTCAACTTTGTTCGACCCGGTGGAGGGCTCGCCTGTGAATCCAGAGAATAAGGCGATGACGGAGGTTTACCTAGGAAAAATATGTAACGTGGTGGCTTGCGAGGGAATAGATCGCGTGGAATGGCACGAGACCCTTAACCAGTGGCAGAACCGGTTCAGTTCGACAGGGTTTTGTCCGGTTCGTTTGAATTCCAACGCGTTCAAGCAGGCTAGCATGTTGCTCGCTCTTTTTGCTGGTGGGGATGGGTATAGGGTGGAGGAGAACAGTGGGTGTCTCATGCTGGGATGGCACACAAGGGCCTTGATTGCCACTTTCGCGTGGCAACTCGCAACGAAATCGGTGGTTGCACTCTGA
1437
0.5247
MKRECEQLGSSAGNSSCGYSSDKSNIWDEEGGMDELLAVVGXKVRSFDMAEIVQKLERLEEAMGNIQDDLKELSDGAAHYNPSDISNXVETMLCNFDLLPPEEPDKGYPSSDXDLKAIPGKAIYDRGVSTTPNAKRRKSTKSTRAFLVVDSQKNGILHVHSLMACAEAVENNNLVVPESLVKQTGFLAVXVGAMQKVTTYFTEVLTWRIYRIFPLQHSIPDSLEIHFYETCPYTKFALFTANQAIQEAFQGKSHVHVIDFGINQGMQWPTLLQALGLRPGGPLTFRLIGIGPPAADNSDQLQEVGWKLAQLAETIHVRIEYHGFGAIDPLSIXIRSEILTVVEQESNHNGLRFLDRFIESLHYYSTLFDPVEGSPVNPENKAMTEVYLGNXICNVVACEGIDRVEWHETLNQWQNRFSSTGFCPVRLNSNAFKQASMLLALFAGGDGYRVEENSGCLMLGWHTRALIATFAWQLATKSVVAL
482
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vium2201g00002
482
PANTHER
OSJNBA0084A10.13 PROTEIN-RELATED
145
324
IPR005202
-
Vium2201g00002
482
Pfam
Transcriptional regulator DELLA protein N terminal
34
98
IPR021914
-
Vium2201g00002
482
ProSiteProfiles
GRAS family profile.
149
473
IPR005202
-
Vium2201g00002
482
Pfam
GRAS domain family
334
473
IPR005202
-
Vium2201g00002
482
Pfam
GRAS domain family
159
324
IPR005202
-
Vium2201g00002
482
SMART
DELLA_2
34
106
-
-
Vium2201g00002
482
Coils
Coil
49
76
-
-
Vium2201g00002
482
Gene3D
-
32
96
IPR038088
-
Vium2201g00002
482
MobiDBLite
consensus disorder prediction
1
24
-
-
Vium2201g00002
482
MobiDBLite
consensus disorder prediction
8
23
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vium2201g00002
Vium-Chr2201
24749
26680
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vium2201g00002
25
476
GRAS Transcription Factor Family
AT1G14920
54.302
0.0
522
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
GRAS
Vium2201g00002
GRAS
8.6e-46
CL0063
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vium2201g00002
K14494
-
gmx:547718
711.064
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