Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2194g00010 ATGGAGGATCTCGAGGAGGAAGAGAACGTAGCGGAGGAGGTGTTGGGGTCAAGCTTGACTATGGAGAAGGTGGCGGCGGCGAAGAAGTTTATTGAGAATCATTATAGGGCTCAGATGAAGAACATCCAAGAGAGGAAGGAGAGGCGTTGGGTGGTGGAGAGAAAATTAGCATCTTCGGATGTGCCAAATGAGGAGCGGATCAATCTTATCAAAGATTTAGAGAGGAAGGATGAATATATGCGATTGAAAAGGCACACAGATTTGTGTTAATGATTTGAACTTTTGACCATCATTGGAAGGAGGGCTTTTGGGGAGGTCAGACTGTGTCGGGAGAAGAAATCTGGAAATATTTATGCTATGAAAAAGCTGAAGAAATCTGAAATGCTTAGGAGAGGCCAGGTGGAACATGTTAGAGTGAGAGAATTGCTGGCTGTAGGTTGCCAGTCATTGCATTGTGAAGCTTTACTATCATTTCAAGATTGCTGGGTAGTACTTGCTACTTGA 504 0.4405 MEDLEEEENVAEEVLGSSLTMEKVAAAKKFIENHYRAQMKNIQERKERRWVVERKLASSDVPNEERINLIKDLERKEXEYMRLKRHTDLCXXFELLTIIGRRAFGEVRLCREKKSGNIYAMKKLKKSEMLRRGQVEHVRVRELLAVGCQSLHCEALLSFQDCWVVLAT 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2194g00010 168 Coils Coil 66 77 - -
Vium2194g00010 168 SUPERFAMILY Protein kinase-like (PK-like) 77 139 IPR011009 -
Vium2194g00010 168 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 161 - -
Vium2194g00010 168 Coils Coil 79 86 - -
Vium2194g00010 168 Gene3D Phosphorylase Kinase; domain 1 18 162 - -
Vium2194g00010 168 CDD MobB_NDR_LATS-like 27 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2194g00010 Vium-Chr2194 84964 89497 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2194g00010 1 161 AGC Kinase Gene Family AT4G33080 73.620 1.82e-72 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2194g00010 K08790 - gmx:100805455 236.498