Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2193g00013 ATGTACGGATTCGAAGCTCTCACTTTCAACATCCATGGCGGCTTTCTCGAGGCTATCGTCCGCGGCCACCGCGCAGGTCTCCTCACTACCGCCGATTACAACAACCTCTGCCAATGCGAAACCCTAGATGACATCAAGATGCACCTCTCCGCCACCGAGTACGGCCCTTACCTCCAAAATGAACCTTCTCCACTGCATACCACCACGATTGTGGAGAAGTGTACTCTTAAGCTGGTTGATGATTACAAGAACATGCTATGCCAAGCAACAGAACCCTTGTCCACTTTTTTAGAGTATATCACTTATGGCCACATGATAGACAATGTTGTTTTGATTGTTACTGGCACTTTGCATGAGAGAGATGTTCAAGAATTACTAGAAAAATGCCATCCACTCGGCATGTTTGACAGTATTGCTACTCTGGCTGTTGCTCAGAATATGCGGGAGCTTTACAGGTTGGTTCTTGTTGACACTCCACTAGCTCCGTACTTCTCTGAATGCATTACATCAGAGGACTTGGATGATATGAACATTGAAATAATGAGGAACACTCTTTACAAGGCATACCTTGAAGACTTCTACAGGTTTTGTCAGAAACTTGGTGGTGCCACAGCTGAGATAATGTCTGACCTTCTAGCTTTTGAGGCTGATAGAAGGGCTGTGAATATTACCATAAATAGCATTGGTACTGAACTAACGAGAGATGACCGTAGAAAATTGTACTCTAATTTTGGTTTGCTATACCCATATGGTCATGAGGAACTTGCTATCTGTGAGGACATTGATCAGGTTCGTGCTGTCATGGAAAAATACCCCCCCTATCAATCTATTTTTGCTAAGCTATCATATGGTGAAAGTCAGATGCTTGACAAGGCATTCTATGAGGAGGAGGTGAAAAGGCTTTGCTTGGCGTTTGAACAACAGTTTCATTATGCTGTGTTCTTCGCATATATGAGGTTAAGGGAACAGGAGATCAGGAATTTAATGTGGATTTCAGAATGTGTTGCTCAGAATCAGAAGTCCAGAGTTCATGACAGTGTTGTCTTCATATTTTAG 1056 0.4318 MYGFEALTFNIHGGFLEAIVRGHRAGLLTTADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDDYKNMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAICEDIDQVRAVMEKYPPYQSIFAKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2193g00013 351 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 351 IPR016727 GO:0033179|GO:0046961|GO:1902600
Vium2193g00013 351 PIRSF V-ATP_synth_D 4 350 IPR016727 GO:0033179|GO:0046961|GO:1902600
Vium2193g00013 351 Gene3D - 206 309 IPR035067 -
Vium2193g00013 351 FunFam V-type proton ATPase subunit 91 205 - -
Vium2193g00013 351 Gene3D - 91 199 IPR035067 -
Vium2193g00013 351 FunFam V-type proton ATPase subunit 206 309 - -
Vium2193g00013 351 FunFam V-type proton ATPase subunit 14 128 - -
Vium2193g00013 351 Pfam ATP synthase (C/AC39) subunit 16 344 IPR002843 GO:0046961
Vium2193g00013 351 Gene3D ATP synthase (C/AC39) subunit, domain 3 18 335 IPR044911 -
Vium2193g00013 351 SUPERFAMILY V-type ATP synthase subunit C 15 349 IPR036079 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2193g00013 1 351 Primary Pumps ATPases(2) AT3G28710 94.302 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2193g00013 K02146 - gmx:100780773 713.375