Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vium2177g00003 | ATGGCTGCCGAAAAAATTGCCGGTGCTCTAGTGTCCACCTTTGTTGAGAGGACTATTGACAATTTGGCTTCTCGTTTTGTAGACATATTTCGTGGAAATAAAAGCCACAAGAAGCAGTTAAGCAACTTGAAGGTGAAGCTCCTAGCCGTTGATGTTGTGGCTGATGATGCAGAACAGAAACAGTTCACAGATCCATGTGTGAGAGATTGGCTTCTCGCAGCCAAAGATGCCGTGTATGATGCAGAGGATCTCCTGGAGGAAATAGACCATGATGCTAAAGAGGTTGGGAATCCCCTCACTTCTTTTATCAGTTTCTTTGAAAATAAATTTGAATCAAGGATGGAAAAACTCATTGAAGACCTAGAAGATCTTGCAACACAAAGTCATCTTCTAGGTTTGGAAAGAGGTCATGATTTTGGGGAGGGATCAAGATCGGGCAGTAAACTAACATCAACATATTTGCCAAACGATAGTGTTATCTATGGCAGAGATGATGACAAAGAATTTGTCTTTAACTGGCTCACATCTGACATTCCCGACAACCTATCTATACTTTCTATAGTGGGAATGGGAGGGGTGGGTAAGACCACTCTTGCCCAACATGTATTCAATGATCCAAGGGTGGATGAGGCTAAATTTGATGTCAGAGCCTGGGTTTGTGTTTCAGTTGAATCTGATGTTTTCAAAGTATCAAGAAAAATTCTTGAGGATGTTACTAGATCACCTGATCATAGTTCAGATACAGATATGGTTCACAGAAGATTGAAAGAAAAATTGACGGGCAAAAAATTTCTTGTTGTTTTGGATGATGTTTGGAACGAAACCCTATCTAATTGGAAAGAGGTGCAAAAACCCCTTCTTCTCGGAGCCCAAGGAAGTAGAATTGTTGTGACTACCCGTAGTAAGGAAGTTGCTTCTACCATGTTTTCAGAAGAACGCTTTCTAAAGCAATTGCAGGAAGATGATAGCTGGGAGTTGTTTGCTAAACATGCATTTCGTGATGATACTCAACCAAATCCAGAATGCAGAGAGATTGGCAAGAAGATTGTTAAAAAATGTAAAGGACTACCTCTTGCCTTGAAAGCAATAGGAAGTCTATTATACAACAAATCATCTGTTTCAGAATGGGACACTGTGTTCCAAAACGAGATATGGGAAATTCCAAAAGATCGTTGTGATATTGTTCCCGCTTTAGCATTGAGCTATGTCCACCTGCCTTCCCATTTGAAGACCTGCTTTGCTTATTGTGCCTTGTTCCGCAAGGATTATGAGTTTAAGAAGGAAGAGTTGACTCAGTTGTGGATGACTGAAAACTTTCAACAGCATAGTAAGACTCCGGATGAAACTTGCCAACAATACTTCAATGATCTATTATCAAGGTCCTTCTTTCAACCCTCAGGTAATGGGAAAGAACTATTTGTCATGCATGACCTTCTAAATGATTTGGCAAGATACATCGCCGGAGACATATTTTTCAGGTGCAAAGATAGTCAAACAAATAATATACAAAAAGTAACTCGGCATTTTTTATTTGAACTTCCTAACTTTGGACGCTTTCATGAATTTGGAACTTTATGCAAAACGGAAAGCTTGCGTACATTTCTACCAACACCAGATAGGAAACTGGATTACTTTCATTGGTTTTGCAGTATGTCGATACATGAATTGTTCTCCGAGTTCATGTTCTTGCGTATTTTATCGCTCTCTCATTGTTCTAACCTTTTAGAGTTACCTGATTCTGTCGGCAATCTTAAACTTCTTCGTTCCTTAGACCTCTCTCATACTGCAATAAGAAAACTACCTGAAAAAATATGTTCACTATCCCACTTGCAAATACTGGAGTTGAACTATTGTACATATTTGGAAGAGTTGCCCATAAATTTGCATTTACTTACTAATTTGTGTAGCCTTGAATTTAGGTTCACTAAAGTGAGAAAAGTGCCACCAGGTTTGGAAAAATTAAAGAATCTTGTAGTAATGATGAATGTCTTTTATGTTGACCATAGCATGGAGTCGGGTATTCAACGGCTAGGAAAGCTTAATAACCTTTCTGAACACCTAGAAATTTGGGGACTGCAGTGCATTAAGAATCCTGAGGATGCATTAGAAGTCGATTTGAAGAATAAAACACACATTGTGAGGCTGACATTGGCATTGGAGAGGACTGGGAACTCTATTGATTCAAAAAAAGAAGAAGACGTAATTGAGAATCTGCAACCTTCCAAAAACTTAAAGGAGTTGTCAATCTTAAACTATGGTGGGAGTAAATTTCCAAACTGGTTACTAGAAGATTCGTTACCAAACCTGGTGTCCTTAGTGTTGCTCAATTGTAAATCTTGCCAACATTTACCTCCGCTTGGTCTTTTGCCATTTCTGAAGAGCCTGTATATTTCAGGGTTTGATGAGACCGTGAGCATTGATGCTTATTTTCATGGAAACAACTCTTCTTCATTTCAATCCCTTAAAAAGTTGGAGTTCTCCGATATGAAGCAATGGGAAAAATGGGAATGCCAAGCTGTGACAGGTGCTTTTCCAAATCTTCAAATTCTTTCTCTGAAGAAATGTCCGAAACTGAAAGGACAGCTGCCAGAGCTACTTGTTCCTTTGAAAACACTAAAAATTACACGTTGCCAACAACTTGAAGCTTTCCCTCCCAGGACTCTAGAATTAGACCTACGTCACTGTGGAAAGTTGCAATTGGATTGGGCTCCAATGGAATGGCCTAGAATGGACGGGCACCACATGACAGCATTTTTCTCTGAAAGTGATGGGTCCCACACTCTTGATGATTTGGAAATTGTAGAGGTAATCAGTGATGGCTCTATCCCTCTAACGACCTTTCCACTAGACTCCTTCCCAACAGTCAAGAGACTTGTTCTCTCTTGGTTACGTAATCTAGAGATGATTTCACAAGATCAAGCTCATCATGATCATCTACTGGATCTGACAATCACAAGATGTCCTAAATTTGAATCGTTGTCTGGAAACATGCGTGTGTTGTCTCTTACATCGCTATGGATAGAAGACTGTCCAAGATTTAAGTCGATCCCTTACGGAGGTTTGCCATCAAATTTGGAGAATCTGACAATCAAAGGGTGCCCTAAGTTTGAATCATTACCCGACTCTGTTGGCAATCTCAAGCTTCTTCGTTCCTTAGACCTCTCTGATACTGCAATAAGAAAACTACCTGAAAATATATGTTCACTATCCCACTTGCAAATACTGGAGTTGAACTATTGTACATATTTGGAGGAGTTGCCCATAAATTTGCATTTACTCACTAATTTGTGTCGCCTTGAATTTAGGTTCACTAAAGTGAGAAAAGTGCCACCAGGTTTGGAAAAGCTAAAAAATCTTAAAGTAATAATGAGTAACTTTAATGTTGACCTTATCATGGAGTCGGGTATTCAACGGCTAGGAAAGCTCAACAACCTTTACGAAGACTTATCAATTGGGGAACTGCATGACATTGAGAATCCTCAGGATGCATTCGAAGCTGATTTGAAGAATAAAACACACATTGAGAGTCTGACATTGGGATGGGAGAGGACTGGGAACTCTATTGATTCAAAAAAAGCAGAGGACGTACTTGAGAATCTGCAACCTTCCAAAACCTTAAAGGAGTTGTCAATCTTTAACCATGGTGAGAATAAATTTCCAAACTGGTTGCAACAAACTTCAATTTGGAATATGGTGTCGTTAGAGTTGGACAAATGTAAATCTTGCCAAAGTTTACCTCCGCTTGGTCTTTTGCCATTCCTCAAGAAGCTGGTGATTTCAGGGTTTGATCAGATAGTGAATGTTGATGCTGATTTTCATGGGAAGAACTCTTCTTCGTTTAAATCTCTTGAAACATTGTATTTCTCCGATATGAGACAATGGGAAAAATGGGAATGTAAAGTTGTGACAGGTGCTTATCCATGTCTACAACATCTTTCTATAAGCTTTTGTCCCAAACTAAAAGGACAATTGCCAGAGCAACTTGTTCCTTTGGAAACACTACACATTACAAACTGCGAACAACTTGAGGCTTTCGCTCCAAGGGCTCTAGATTTAGAACTACGTAACTGTGGAAAGCTACAATTGGATTCGGCCATGAAAAGGCTCGTAATGGGTGGGCACAACACGGAAGCATCCTTGCTGGAAATGGTTGGATCTAACACTCTTGAGCACTTGGACATTTCTTCATCCCTGGAGTCCATGAGTGATGACTGTGTCTTTGTAAGGACCATTTCACTAGATTTCTTTCCAATACTCAGGACCCTTAATCTTAGAGGGTTTGGTAATCTACAGAAGGTTTTACAGGATCACGCTCATTATCATCTCCAGGATCTGACAATCAAAAAATGTCCTAAATTTGAATCATTATCTGGAATCATGCATATGTTGTCTCTCAAATCACTATGGATAGAAGATTGTCCGAGACTTGTGTCGTTTCCTGATGGAGGTTTGCCATCAAATCTAAATGACATGAGACTGAGTAATTGTTCTAGACTTGTTTGCTCACTGAAAGGAGCTTTCGGAGACCGTTCTTCTTTGGAAAGCTTGTGGATTGAAGGAATGGATGCAGAATGTTTTCCTGGTGAAGGCTTGCTTCCACTCTCTCTTACTTCTTTAACAATATGTGATTGTCCAAATCTAGAAAAGTTAGATTATAAAGGTCTTTATCAACTCTCATCTCTCAGAAGACTGACTCTTGTTAGCTGCCCTAACCTCCAATGCTTACCAGAGGAAGGTCTTCCAAGATCAATTTCATATCTTTGTATAGGCGATTGTCCTTTGCTCGAACAGCGTTGCCAGACAGAAGGAGGGGAAGATTGGGAAAAGATTGCTCACATTCAAAATCTGAATATATTGTAA | 4860 | 0.3959 | MAAEKIAGALVSTFVERTIDNLASRFVDIFRGNKSHKKQLSNLKVKLLAVDVVADDAEQKQFTDPCVRDWLLAAKDAVYDAEDLLEEIDHDAKEVGNPLTSFISFFENKFESRMEKLIEDLEDLATQSHLLGLERGHDFGEGSRSGSKLTSTYLPNDSVIYGRDDDKEFVFNWLTSDIPDNLSILSIVGMGGVGKTTLAQHVFNDPRVDEAKFDVRAWVCVSVESDVFKVSRKILEDVTRSPDHSSDTDMVHRRLKEKLTGKKFLVVLDDVWNETLSNWKEVQKPLLLGAQGSRIVVTTRSKEVASTMFSEERFLKQLQEDDSWELFAKHAFRDDTQPNPECREIGKKIVKKCKGLPLALKAIGSLLYNKSSVSEWDTVFQNEIWEIPKDRCDIVPALALSYVHLPSHLKTCFAYCALFRKDYEFKKEELTQLWMTENFQQHSKTPDETCQQYFNDLLSRSFFQPSGNGKELFVMHDLLNDLARYIAGDIFFRCKDSQTNNIQKVTRHFLFELPNFGRFHEFGTLCKTESLRTFLPTPDRKLDYFHWFCSMSIHELFSEFMFLRILSLSHCSNLLELPDSVGNLKLLRSLDLSHTAIRKLPEKICSLSHLQILELNYCTYLEELPINLHLLTNLCSLEFRFTKVRKVPPGLEKLKNLVVMMNVFYVDHSMESGIQRLGKLNNLSEHLEIWGLQCIKNPEDALEVDLKNKTHIVRLTLALERTGNSIDSKKEEDVIENLQPSKNLKELSILNYGGSKFPNWLLEDSLPNLVSLVLLNCKSCQHLPPLGLLPFLKSLYISGFDETVSIDAYFHGNNSSSFQSLKKLEFSDMKQWEKWECQAVTGAFPNLQILSLKKCPKLKGQLPELLVPLKTLKITRCQQLEAFPPRTLELDLRHCGKLQLDWAPMEWPRMDGHHMTAFFSESDGSHTLDDLEIVEVISDGSIPLTTFPLDSFPTVKRLVLSWLRNLEMISQDQAHHDHLLDLTITRCPKFESLSGNMRVLSLTSLWIEDCPRFKSIPYGGLPSNLENLTIKGCPKFESLPDSVGNLKLLRSLDLSDTAIRKLPENICSLSHLQILELNYCTYLEELPINLHLLTNLCRLEFRFTKVRKVPPGLEKLKNLKVIMSNFNVDLIMESGIQRLGKLNNLYEDLSIGELHDIENPQDAFEADLKNKTHIESLTLGWERTGNSIDSKKAEDVLENLQPSKTLKELSIFNHGENKFPNWLQQTSIWNMVSLELDKCKSCQSLPPLGLLPFLKKLVISGFDQIVNVDADFHGKNSSSFKSLETLYFSDMRQWEKWECKVVTGAYPCLQHLSISFCPKLKGQLPEQLVPLETLHITNCEQLEAFAPRALDLELRNCGKLQLDSAMKRLVMGGHNTEASLLEMVGSNTLEHLDISSSLESMSDDCVFVRTISLDFFPILRTLNLRGFGNLQKVLQDHAHYHLQDLTIKKCPKFESLSGIMHMLSLKSLWIEDCPRLVSFPDGGLPSNLNDMRLSNCSRLVCSLKGAFGDRSSLESLWIEGMDAECFPGEGLLPLSLTSLTICDCPNLEKLDYKGLYQLSSLRRLTLVSCPNLQCLPEEGLPRSISYLCIGDCPLLEQRCQTEGGEDWEKIAHIQNLNIL | 1619 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vium2177g00003 | 1619 | PANTHER | DISEASE RESISTANCE PROTEIN RP | 980 | 1340 | IPR044974 | GO:0006952 | |
| Vium2177g00003 | 1619 | Gene3D | Ribonuclease Inhibitor | 930 | 1133 | IPR032675 | - | |
| Vium2177g00003 | 1619 | Gene3D | - | 317 | 400 | IPR042197 | - | |
| Vium2177g00003 | 1619 | FunFam | Probable disease resistance protein At1g61300 | 145 | 313 | - | - | |
| Vium2177g00003 | 1619 | Pfam | Rx N-terminal domain | 14 | 93 | IPR041118 | - | |
| Vium2177g00003 | 1619 | SUPERFAMILY | L domain-like | 1388 | 1611 | - | - | |
| Vium2177g00003 | 1619 | Gene3D | Ribonuclease Inhibitor | 1326 | 1485 | IPR032675 | - | |
| Vium2177g00003 | 1619 | Gene3D | Ribonuclease Inhibitor | 1486 | 1602 | IPR032675 | - | |
| Vium2177g00003 | 1619 | Gene3D | Ribonuclease Inhibitor | 1148 | 1325 | IPR032675 | - | |
| Vium2177g00003 | 1619 | PRINTS | Disease resistance protein signature | 605 | 621 | - | - |
Showing 1 to 10 of 27 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vium2177g00003 | - | - | vra:106752401 | 2904.78 |
Showing 1 to 1 of 1 entries