Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2169g00001 ATGGCGTTTCTGGGTCTCTTGTTTTCGATGATTCCTACGCTGCTTCTTGTTGCGTCATCATCATCAAAGTTTCAAGCTGAGGCAAGACAGTATGATGTTGGTGGAAGAGATGGGTGGGTGGCCAAGCCTTCCGAAGACTACAACCACTGGGCTCAGAGGAACAGATTTCAAGTCAACGATACTCTCCATTTCAAGTACAACAAAGGCATAGATTCAGTTGTGGTGGTGAAGAAGGAGGATTTCGATTCATGCAACATCAACAACCCCATTCAGAAAATGGACGATGGTGATTCAATTTTCCCACTTTCTCATTCGGGTCTCTTTTATTTCGTAAGTGGCAACCTTGACAACTGCAAAATCGGTCAAAAACTCATTGTTCTTGTCATGGCCGTCAGACAACCTCCTCCTGTGACTGCGCCGCCGCCTACAAGCGCCCTGCCGCCGCAGACTGTTCCGGCAACGGGGCTGACCTCTCCGGCGCCGCCCCCATCGGATAAATCGGGCTCAGGGAGGGTT 516 0.5 MAFLGLLFSMIPTLLLVASSSSKFQAEARQYDVGGRDGWVAKPSEDYNHWAQRNRFQVNDTLHFKYNKGIDSVVVVKKEDFDSCNINNPIQKMDDGDSIFPLSHSGLFYFVSGNLDNCKIGQKLIVLVMAVRQPPPVTAPPPTSALPPQTVPATGLTSPAPPPSDKSGSGRV 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2169g00001 172 ProSiteProfiles Phytocyanin domain profile. 29 130 IPR003245 GO:0009055
Vium2169g00001 172 Pfam Plastocyanin-like domain 39 122 IPR003245 GO:0009055
Vium2169g00001 172 CDD OsENODL1_like 29 129 IPR041846 -
Vium2169g00001 172 Gene3D - 27 132 IPR008972 -
Vium2169g00001 172 MobiDBLite consensus disorder prediction 136 172 - -
Vium2169g00001 172 FunFam Early nodulin-like protein 1 28 133 - -
Vium2169g00001 172 SUPERFAMILY Cupredoxins 28 129 IPR008972 -
Vium2169g00001 172 PANTHER BLUE COPPER PROTEIN 29 134 IPR039391 GO:0009055
Vium2169g00001 172 MobiDBLite consensus disorder prediction 136 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2169g00001 Vium-Chr2169 5 1087 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2169g00001 5 152 Phytocyanin Superfamily AT5G53870 48.993 7.97e-47 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2169g00001 - - vum:124829362 332.028