Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vium2160g00008 | ATGGTTGGATTCCAGAGTGACCATAAGCCCGGGAACAAGTACAATGGTAATTCTAATATTATTCCGGATCGTGTTGAACGTCTTATGAGACGAAGAGAGCTTTTTAAAAGCAGCAAGGCATCTCTTTTGAATGAGGCTCCTGATAGTAATAATAATAATAATAATGTGATTACTGAATATTTTGAGCATGACCCGCGCTTAAGGGAAGATAATAACTCTGCTGCTTCCTATGAACGATTACTGGAAGGAGTGGCAGCGGCAGTGCGGGGCGAGAGGGAGGATGGGAAACCTTTCAAACAAAGGCTTTTGGTAGTGGCCAATAGGCTGCCAGTCTCGGCAATTAGGAAAGGCGAGGATTCGTGGTCCTTGGAGATAAGTGCTGGTGGCCTGGTGAGCGCTCTGTTAGGTGTGAAGGCTTTGGAGGCAAGGTGGATAGGTTGGGCTGGAGTCAATGTGCCAGATGAGATTGGACAAAAAGCACTTACTAAAGCTTTGGCTGAAAAGAGGTGTATCCCAGTATTTCTTGATGAAGAGATTGTTCATCAATATTATAATGGCTATTGTAACAATATTCTCTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGACCGCCTTGCTACCACACGTAGTTTCCAATCTCAATTTGAAGCATACCAGAAGGCAAATCAAATGTTTGCCGATGTTGTAAACAAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCACAATGCTTAAAGAATTATAACCCCAAAATGAAAGTTGGCTGGTTTCTTCATACCCCATTTCCATCTTCTGAGATTCACAGGACATTGCCTTCTCGTTCAGAGCTTCTGCATGCTGTTCTTGCAGCTGATTTGGTTGGTTTTCACACCTACGACTATGCACGACATTTTGTCAGTGCATGTACCCGCATACTTGGACTTGAGGGAACGCCTGAAGGGGTTGAGAATCAAGGGAAGCTGACTCGAGTAGCAGCATTTCCAATAGGTATAGACTCAGAACGATTCAAACGTGCACTTGACCTTCCTCAAGTGAAGGGTCACATAAAAGAATTACAAGAGAGATTTAAAGGGAGAAAGGTAATGTTAGGTGTTGATCGTCTTGATATGATCAAAGGAATCCCTCAAAAAATTCTGGCATTTGAAAAATTTTTGGAAGAGAGTCCTGATTGGCGTGATAAAGTTGTTCTGCTTCAAATTGCCGTGCCAACAAGGACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTCCATGAAATTGTTGGTCGCATCAATGGCAGATTTGGAACACTTGCTACCGTTCCCATACATCACCTGGATTGCTCTCTTGATTTTCATAAACTATGTGCTTTGTACGCTGTTACGGATGTAGCACTTGTCACCTCTTTAAGGGATGGAATGAATCTTGTAAGTTACGAATTTGTGGCTTGCCAAGATAAAAAGAAAGGGGTTCTCATTCTCAGCGAATTTGCTGGTGCTGCACAGTCACTTGGCGCTGGGGCAATTCTGGTCAACCCTTGGAACATCACGGAAGTTGCTGCTGCAATTGCCAAGGCTCTGAATATGAAATCAGAAGAACGAGAGAAGAGACATAAGCATAACTTTAAACATGTAACAACCCACACTGCTCAGGAATGGGCAGAAACTTTTGTGAGTGAACTAAATGATACTATTGATGAGGCACAATTAAGGACCAAACAAGTTCCACCAAGGCTCCCAACGGAGATTGCAGTTGAGCGTTATTTGCAGTCAAATAATCGGTTGATTATTTTGGGTTTCAATGGAACTCTAACTGTACCAGTTGAGAGAAAAGGTGATCAGTATCAAGAAACGGAACTTACAGTGCATCCAGAACTGAAACAACCCTTGGCAGAACTTTGCAGTGACCCAAAGACCACAGTTGTTGTGCTTAGTGGAAGTGGTAGACCAGTTCTAGATCAAAACTTCAAAGAGTATGACATCTGGCTAGCAGCAGAGAATGGAATGTTTTTAAACCCTTCTAAGGGAGAATGGATGACAACAATGCCAGAGCAACTAAATATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGACTACTTCACAGATAGAACACCTCGATCACATATTGAAGAAAGGGATGCTTCACTTGTATGGAGTTACAGACATTCAGATGTTGAGTTTGGAAGACTGCAAGCAAGGGACATGCTGCAGCATCTCTGGACAGGGCCAATTTCTAATGCTTCAGTTGAAGTTGTTCAAGGGAGCCGGTCTGTTGAGGTGCGAGCTGCTAATGTTACTAAGGGAGCAGCCATTGACCGTATTCTAGGGGAGATAGTCCACAGTAAATCCATGACAACACCAATTGATTATGTTTTGTGTATAGGACATTTTCTAACAAAGGATGAAGATATATATGCGTTTTTTGAGCCAGAGTTACCTTCTATTGGTGTGGGTCTTCCACGAAGTAAGGTAACAGAAGGAGTTAAGTTTCCTGCGGAGAGGATATCATCGTTGAAGATTCCAGCAAGTAAAAATGGAGCAGCAAAATCATCCCAAAATAAGGGACAACGTGTTGTGCCAAATTCTGAGAAGAAAACAAATAATCATGTGTGCCGTGCGCCACGTCGTCCAGCTCCTGAAAAGATCTCTTGGAATGTCCTTGACCTGAAGAAAGAGAATTACTTTTCTTGTGCTGTTGGAAGAACACAAACGAATGCTCGGTATACGCTTGGATCACCGGATGAAGTTGTTGCATTTCTGAAGGAACTAGTCAACTCATCTCCATACTCTTATGTCTGA | 2814 | 0.4268 | MVGFQSDHKPGNKYNGNSNIIPDRVERLMRRRELFKSSKASLLNEAPDSNNNNNNVITEYFEHDPRLREDNNSAASYERLLEGVAAAVRGEREDGKPFKQRLLVVANRLPVSAIRKGEDSWSLEISAGGLVSALLGVKALEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYQKANQMFADVVNKHYEEGDVVWCHDYHLMFLPQCLKNYNPKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVENQGKLTRVAAFPIGIDSERFKRALDLPQVKGHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEESPDWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLATVPIHHLDCSLDFHKLCALYAVTDVALVTSLRDGMNLVSYEFVACQDKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAKALNMKSEEREKRHKHNFKHVTTHTAQEWAETFVSELNDTIDEAQLRTKQVPPRLPTEIAVERYLQSNNRLIILGFNGTLTVPVERKGDQYQETELTVHPELKQPLAELCSDPKTTVVVLSGSGRPVLDQNFKEYDIWLAAENGMFLNPSKGEWMTTMPEQLNMEWVDSVKHVFDYFTDRTPRSHIEERDASLVWSYRHSDVEFGRLQARDMLQHLWTGPISNASVEVVQGSRSVEVRAANVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLTKDEDIYAFFEPELPSIGVGLPRSKVTEGVKFPAERISSLKIPASKNGAAKSSQNKGQRVVPNSEKKTNNHVCRAPRRPAPEKISWNVLDLKKENYFSCAVGRTQTNARYTLGSPDEVVAFLKELVNSSPYSYV | 937 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vium2160g00008 | 937 | SUPERFAMILY | HAD-like | 598 | 929 | IPR036412 | - | |
| Vium2160g00008 | 937 | MobiDBLite | consensus disorder prediction | 848 | 873 | - | - | |
| Vium2160g00008 | 937 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 100 | 569 | - | - | |
| Vium2160g00008 | 937 | Gene3D | - | 688 | 768 | - | - | |
| Vium2160g00008 | 937 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like | 348 | 550 | - | - | |
| Vium2160g00008 | 937 | Pfam | Glycosyltransferase family 20 | 101 | 566 | IPR001830 | GO:0003824|GO:0005992 | |
| Vium2160g00008 | 937 | NCBIfam | alpha,alpha-trehalose-phosphate synthase (UDP-forming) | 101 | 566 | IPR012766 | GO:0003825|GO:0005992 | |
| Vium2160g00008 | 937 | Gene3D | Glycogen Phosphorylase B; | 93 | 347 | - | - | |
| Vium2160g00008 | 937 | CDD | HAD_TPP | 599 | 830 | - | - | |
| Vium2160g00008 | 937 | Gene3D | - | 602 | 825 | IPR023214 | - |
Showing 1 to 10 of 18 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vium2160g00008 | K16055 | - | gmx:100789554 | 1677.14 |
Showing 1 to 1 of 1 entries