Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2159g00005 ATGTCATTATCACCTCCATCTCTGGTAACGGCAGCGATCGCTGCAGATCTTCCGATCCGCCAGATTCCGGGAAGCTACGGGTTCCCGTTGCTGGGCCCCTTATCGGACCGACTCGACTACTTCTGGTTCCAGAAGCCGGAGAGCTTCTTCAAGAACCGAATGGAGAAGTACAAGAGCACGGTGTTCCGCACCAATGTTCCTCCCTCCTTCCCCTTCTTCGTCAATGTTAATCCCAACGTCATCGCAGTTCTCGATGTCAAATCCTTCTCCCACCTCTTCGATTTCGACCTCGTCGACAAGAAGGACGTTCTCGTCGGAGACTTTGTTCCCGACGTCAGCTTCACCGGAAATATGAGGGTCGGCGTCTACCAGGACCCCTCCGAACCTCAACATTCCAAGGTGAAGGGCTACATAATAGATATCCTAAAACGAAGCTCGGGAATATGGGCATCAGAACTAGTGTCCAACCTAGACGTATTCTGGGACAACATCGAATCAACAGTCTCAAAATCTTCATCTGCGTCCTATTTGTTCCCTCTGCAACAATTTCTCTTCACTTTCCTCTGCAAAGTTCTGGCAGGTGCAGACACTTCTCGTGACCCCAAAATCGCAGAGTCAGGCCATGCCATGCTTAATCGATGGCTTGCCCTTCAGCTCCTCCCCATTACCAGCATCGGCATACTCCAACCTCTTGAAGAAATCTTCCTCCATTCCTTCGCTTACCCTTCCTTTCTCGTTAGTGGAGACTACAACAACATCTATAACTTTGTCAAGCAACAAGGGAAGGATACCATAAACAGAGGCGAAATCGGGTTCGGGTTGACCCAAGAAGAGGCAATCCACAACCTACTCTTCGTTCTAGGGTTCAATTCCTTCGGGGGCTTCACCATTTTCCTCCCATCTTTGATTGATGCCGTAGCGAAAGACTCCGCGTTGCAGGAGAAGCTGAAGAAGGAAGCCAGGGAAAACGGCGGCTCAACGCTGACCTTTGACTCCGTCAAAGAGATGCCTCTCGTCCAATCGGTGGTCTACGAAACGCTGCGTATGAACCCTCCGGTTCCGCTGCAGTTCGGTCGCGCTCGAAAGGACTTCCGTTTGACTTCTCACGACTCCGTTTACGACGTGAAGAAGGGGGAGTTGTTATGCGGCTTCCAGAAGCTCGTCATGAGAGACTCTCTCATCTTCGACGAACCGAACCTCTTTAAGCCGGACCGGTTCACGAAGGAAAAAGGGGCCCAGTTGCTGGACTACTTGTACTGGTCCAATGGGCCTCAAAGTGGGTCACCCACTCTGTCCAATAAACAATGCGCCGGCAAGGACGTTGTCGCCCTCACTGCGGCCTTGCTTGTGGCTCACCTGTTTCGCAGGTATGATTCCATCACCGGCGATGGCAGTTCCATCACTGCCCTTCAAAAGTCTAAGTGA 1425 0.5158 MSLSPPSLVTAAIAADLPIRQIPGSYGFPLLGPLSDRLDYFWFQKPESFFKNRMEKYKSTVFRTNVPPSFPFFVNVNPNVIAVLDVKSFSHLFDFDLVDKKDVLVGDFVPDVSFTGNMRVGVYQDPSEPQHSKVKGYIIDILKRSSGIWASELVSNLDVFWDNIESTVSKSSSASYLFPLQQFLFTFLCKVLAGADTSRDPKIAESGHAMLNRWLALQLLPITSIGILQPLEEIFLHSFAYPSFLVSGDYNNIYNFVKQQGKDTINRGEIGFGLTQEEAIHNLLFVLGFNSFGGFTIFLPSLIDAVAKDSALQEKLKKEARENGGSTLTFDSVKEMPLVQSVVYETLRMNPPVPLQFGRARKDFRLTSHDSVYDVKKGELLCGFQKLVMRDSLIFDEPNLFKPDRFTKEKGAQLLDYLYWSNGPQSGSPTLSNKQCAGKDVVALTAALLVAHLFRRYDSITGDGSSITALQKSK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2159g00005 474 FunFam Allene oxide synthase, chloroplastic 17 473 - -
Vium2159g00005 474 PRINTS E-class P450 group IV signature 336 352 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2159g00005 474 PRINTS E-class P450 group IV signature 373 387 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2159g00005 474 PRINTS E-class P450 group IV signature 389 407 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2159g00005 474 SUPERFAMILY Cytochrome P450 18 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2159g00005 474 PANTHER CYTOCHROME P450 26 18 457 - -
Vium2159g00005 474 Gene3D Cytochrome P450 17 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2159g00005 474 CDD CYP74 51 466 - -
Vium2159g00005 474 Pfam Cytochrome P450 307 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2159g00005 Vium-Chr2159 8864 22826 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2159g00005 95 474 Cytochrome P450 AT4G15440 59.115 1.16e-173 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2159g00005 K10528 - gmx:100784395 801.586