Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2151g00001 ATGGTCTGTCTCAAAATACAGCAACACACAAAAACACTCGAGGGCATGAAAATGAGGTTTCTTTGTGTTGTGGTAACAGCCCTAGTGGTACTTGGAGGGTTACCCTTTTCCTCAGATGCACAACTAGACCCCTTCTTCTACCAGCGGACTTGTCCACCTGTGCGTCATGTTGTGTTCCGAGTGGTAGAGAGAGCTTCACAAAAGGATCCTCGTCTGCCTGCCAGTATCGTCAGGCTTTTCTTTCACGACTGTTTTGTTCAAGGTTGTGATGCATCGATTTTGTTGAACAACACTGCAACGATAGTGAGTGAGCAACAAGCCCTGCCAAACAACAACTCCATAAGAGGTTTGGATGTGGTGAATGACATCAAGACAGCAGTGGAGAATGTTTGTCCCGGCGTTGTTTCTTGTGCAGATATTCTTACCATTGCAACTGAAGTTTCTTCTATTCTGGCTGGTGGTCCTTTCATCAAATTTCCATTGGGAAGAAGGGATAGTTTAACAGCAAACAGAACACTTGCGAATCAAAACCTTCCTTCTCCTTTCTCCACACTCGATCAACTCAAAGCAGCATTTGCTGTTCAACGTCTTGACACTGTTGATCTAGTTGCACTCTCAGGTGCTCATACATTTGGCAGAGCTCACTGCTTTTTCATTCTTAGCCGATTGTACAACTTCAGTGGCACTGGCAGACCCGATCCAACTCTGGACCCTGCTTACGCACAACAATTGCGCAATATATGCCCTCAAGGTGGACCAAACAACTTGGTAAATTTTGACCCAACCACTCCTGATAGACTCGACAAAAACTATTACTCCAACCTTCAGGTTAAGAGGGGTTTGCTTCAGAGTGACCAAGAGTTGTTCTCCACACCCGGTGCTGACACCATCGCCCTTGTGAACAGGTTCAGTGCTGACCAAAACGCTTTCTTTAGCAGCTTTGCCAAATCAATGATAAAAATGGGAAATATCGGTGTTCTCACCGGGAACAGAGGAGAAATCAGAAAACAATGTAATTTTATTAACAGAAGATCCGTTGAAGTTGATATGGGAACTGTGGCCTCCGAATCAGAGGAGGGTATGGTTAGCTCTATATACCCAAAGCATTTGGGGAAGCTCACAAGAACATCACATTCACAGCTCAAAACACAAGAAACAATGAGTTCTTTCAGTGTTTTCACAGTGAAAGTAGCACTTTTCTGTGTGGTGGTTTTGCTTGCAGCATCACAACCCTTCTCAAATGCACAGCTTGATAACTCTTTTTACAGGGACACATGTCCAAGGGTGCATTCTATTGTTCGTGAAGTTCTCAGAAATGTCTCAAAATCTGATCCTCGTATTCTCGCCAGTCTCATAAGACTTCACTTCCATGATTGCTTTGTTCAGGGTTGTGATGCATCAGTTCTTTTGAACAGCACTGATACGATCGTGAGTGAGCAAACTGCAGCGCCAAATAACAACAGCTTAAGAGGTTTGGATGTTGTGAATCAGATCAAGACAGCAGTAGAAAATGCTTGCCCTGGCATTGTTTCTTGTGCTGATATTCTTGCTCTTGCAGCTGAGATATCTTCTGTTCTGGCTCATGGTCCCGATTGGAAAGTTCCTCTGGGAAGAAGAGACAGTTTAAACGCAAGTTTTGATCTTGCTAATCAAAATCTTCCTGGTCCTAATTTCTCCCTCGACCAACTGAAATCTGCATTCGAAAGACAAAACCTCAACACAACCGATCTAGTTGCACTTTCAGGTGCTCATACAATTGGCAGAGCTCAATGCAGATTTTTTGTGAATCGATTATACGATTTCAACAGCACTGGAAACCCTGACCCAACTCTTAACACAACCTTGTTACAAGCACTTCGAGCAATTTGCCCCAACGGTGGATCTGGAACCAATCTCACCAACCTGGACCTAAGCACACCTGATAGACTTGACTCTAACTACTACTCCAATCTTCAACTTCAAAATGGCTTACTTCGAAGTGATCAAGAGTTGTTTTCCACCACTGGTGCAGATACCATTCCCATTGTCAACAGCTTCAGCAGTAACCAAACTCTTTTCTACGAAAATTTTAAGGCTTCGATGATAAAAATGAGCATCATACAAGTTCTCACAGGAACACAGGGAGAGATTCGAGCACACTGTAACTTTGTCAATGGAAATTCAGCTACTTTCACTACTCTACCTACCCAACAATCTTCAGAAGATGGTGTTGTGAGCTCAATCTAA 2226 0.4344 MVCLKIQQHTKTLEGMKMRFLCVVVTALVVLGGLPFSSDAQLDPFFYQRTCPPVRHVVFRVVERASQKDPRLPASIVRLFFHDCFVQGCDASILLNNTATIVSEQQALPNNNSIRGLDVVNDIKTAVENVCPGVVSCADILTIATEVSSILAGGPFIKFPLGRRDSLTANRTLANQNLPSPFSTLDQLKAAFAVQRLDTVDLVALSGAHTFGRAHCFFILSRLYNFSGTGRPDPTLDPAYAQQLRNICPQGGPNNLVNFDPTTPDRLDKNYYSNLQVKRGLLQSDQELFSTPGADTIALVNRFSADQNAFFSSFAKSMIKMGNIGVLTGNRGEIRKQCNFINRRSVEVDMGTVASESEEGMVSSIYPKHLGKLTRTSHSQLKTQETMSSFSVFTVKVALFCVVVLLAASQPFSNAQLDNSFYRDTCPRVHSIVREVLRNVSKSDPRILASLIRLHFHDCFVQGCDASVLLNSTDTIVSEQTAAPNNNSLRGLDVVNQIKTAVENACPGIVSCADILALAAEISSVLAHGPDWKVPLGRRDSLNASFDLANQNLPGPNFSLDQLKSAFERQNLNTTDLVALSGAHTIGRAQCRFFVNRLYDFNSTGNPDPTLNTTLLQALRAICPNGGSGTNLTNLDLSTPDRLDSNYYSNLQLQNGLLRSDQELFSTTGADTIPIVNSFSSNQTLFYENFKASMIKMSIIQVLTGTQGEIRAHCNFVNGNSATFTTLPTQQSSEDGVVSSI 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2151g00001 741 SUPERFAMILY Heme-dependent peroxidases 41 342 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 SUPERFAMILY Heme-dependent peroxidases 416 718 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 Gene3D - 421 718 - -
Vium2151g00001 741 Pfam Peroxidase 61 305 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 Pfam Peroxidase 433 681 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 ProSiteProfiles Plant heme peroxidase family profile. 41 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 PRINTS Haem peroxidase superfamily signature 636 651 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 PRINTS Haem peroxidase superfamily signature 510 527 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 PRINTS Haem peroxidase superfamily signature 448 462 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 PRINTS Haem peroxidase superfamily signature 528 540 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 PRINTS Haem peroxidase superfamily signature 576 591 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 FunFam Peroxidase 45 190 - -
Vium2151g00001 741 CDD secretory_peroxidase 41 341 IPR033905 GO:0004601|GO:0042744
Vium2151g00001 741 FunFam Peroxidase 554 697 - -
Vium2151g00001 741 Gene3D - 46 342 - -
Vium2151g00001 741 FunFam Peroxidase 179 321 - -
Vium2151g00001 741 FunFam Peroxidase 420 566 - -
Vium2151g00001 741 PANTHER PEROXIDASE 72-RELATED 39 340 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 CDD secretory_peroxidase 416 717 IPR033905 GO:0004601|GO:0042744
Vium2151g00001 741 ProSitePatterns Peroxidases proximal heme-ligand signature. 576 586 IPR019793 -
Vium2151g00001 741 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Vium2151g00001 741 ProSiteProfiles Plant heme peroxidase family profile. 416 718 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 PRINTS Plant peroxidase signature 650 667 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 PRINTS Plant peroxidase signature 528 543 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 PRINTS Plant peroxidase signature 692 705 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 PRINTS Plant peroxidase signature 634 649 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 PRINTS Plant peroxidase signature 509 519 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 PRINTS Plant peroxidase signature 426 445 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 PRINTS Plant peroxidase signature 575 587 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 PRINTS Plant peroxidase signature 450 470 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 PRINTS Plant peroxidase signature 490 503 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2151g00001 741 Gene3D Peroxidase, domain 2 554 697 - -
Vium2151g00001 741 Gene3D Peroxidase, domain 2 179 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2151g00001 Vium-Chr2151 18374 29967 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2151g00001 398 739 Peroxidase AT5G06730 57.558 7.55e-129 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2151g00001 - K00430 vum:124829290 1453.34