Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2149g00001 ATGGTATTCTCTACAGCATATGGGAGAGGTGATGAACTTAGTTGGGGAAGCATCAAAGGGTTTTCACTCCAACTTCTTACAGGGAGGTGGTTCATGATGTTTTCATCATTTATGTTGATGTCAGTGTCAGGAGCAAGCTACATGTTTAGCCTATTCTCACAAGATATCAAGTTAGTTCTTGGTTATGATCAATCCACTCTCAATCTATTAAGCTTCTTCCAGGATTTGGGAGCCAACATAGGCATTCATGCGGGCCTAATCTATGAGGTCACACCACCTTGGTTTATCTTAACAATTGGTGGGATTCTCAACTTTGCTGGGTATTTTATGATTTGGCTTGTTGTCACCAGCAAAATTGCAAAGCCCCATGTGTGGCATATGTGCTTCTACCTTTTCATTGGAGCCAATTCTCATTGTGCAACTAACACTGGAGCTCTTGTGACCAGTGTAAAGAACTTCCCTATCAGCAGAGGAGTAGTCTTAGGCCTTTTGACTGGGTATACAGGTTTAAGTGCAGTAATAATTACTCAGCTATACTATGCCTTGTATGGAGATGACTCCAAATTCCTCATTTTTCTCATGGCATGGCTACCAATTGCTGCAGTTTTTCTGTTTCTTCCAGTTATCAGAATCCACAAGAGTGTTCAACAGCCAAATGACACCAAAGTTTTATACAGGTTCCTCTATCTGACATTAGTCCTTGCAGGGTTCCTCATGTTTGTAACTTTAGTACAACAATTTTTCACTTTCTCTCAGTTTGAGTATCAGATTACTACCACTTTGATGCTTCTTCTGCTCATCCTTCCACTTTCTGTTGTTATTTTGGAAGAACACAAGATTTGGAAGAGTAAGCTTGAAAACATCAATAGGGAAGATAGTCAGAAGCTCCTGGAAAACTATCCAAACATAGCTACAGAAAATCTTTATCAAGAGAAGTCTTCCCAGGCTCCCCAAGCAGAAATCTCCTTTTGGGAAAACATATTCAACCCCCCAGCAAGAGGTGAAGATCATACAATACTTCAAGCCACATTTAGCCTTGACATGGTGCTTCTCTTATTAACTACTATATGTTCACTTGGTAGCAACGTTACAATGATAAACAACTTGAGTCAAATTGGAATTTCATTAGGATATCCTTCTCATACCATAACCACATTTGTCTCTCTTACATCCATTTGGATCTATTTAGGTAAGGTGGTTCAAGGGGTTGTCTCAGAGTTTATCATACTCAAATATGGAGTCCCTAGGCCTCTCTTGCTCACATCATTGCTTTTGTTATCTTGTGTAGGTCATCTTTTAGTTGCCTTCAATGTCCCAAATGGTCTCTATGTAGCCTCAATTGTTATTGGGTTCTGCTATGGGGCTAATTGGCCATTAATGTATTCTGTTATATCTGAACTTTTTGGCCTCAAACATTATTCAACACTGTACAATTTAGGGTCACTGGTAGGTCCAATTGGGTCATACTTGCTCAGTGTGAGGGTTGTAGGGTATCTGTATGACAGGGAAGCCATGAGGCAAATGGAAGCTATGGGGAAAAAGACAAGTCCAGGGGAGGAGCTGAACTGCAATGGGGAGGAGTGCTTCAAGTTAGCATTCATTATAATCACTGCAGTTAGCTTGTTTGGGGCACTTCTGTCACTCATTTTGGTCTTTAGGACCAAACGATTCTACAGAAGTGACCTATACAAGAAATACAAAGAAGCTAAAACTGATGAAACTGAAGCAGGTATGATACAACATGATTGA 1749 0.4019 MVFSTAYGRGDELSWGSIKGFSLQLLTGRWFMMFSSFMLMSVSGASYMFSLFSQDIKLVLGYDQSTLNLLSFFQDLGANIGIHAGLIYEVTPPWFILTIGGILNFAGYFMIWLVVTSKIAKPHVWHMCFYLFIGANSHCATNTGALVTSVKNFPISRGVVLGLLTGYTGLSAVIITQLYYALYGDDSKFLIFLMAWLPIAAVFLFLPVIRIHKSVQQPNDTKVLYRFLYLTLVLAGFLMFVTLVQQFFTFSQFEYQITTTLMLLLLILPLSVVILEEHKIWKSKLENINREDSQKLLENYPNIATENLYQEKSSQAPQAEISFWENIFNPPARGEDHTILQATFSLDMVLLLLTTICSLGSNVTMINNLSQIGISLGYPSHTITTFVSLTSIWIYLGKVVQGVVSEFIILKYGVPRPLLLTSLLLLSCVGHLLVAFNVPNGLYVASIVIGFCYGANWPLMYSVISELFGLKHYSTLYNLGSLVGPIGSYLLSVRVVGYLYDREAMRQMEAMGKKTSPGEELNCNGEECFKLAFIIITAVSLFGALLSLILVFRTKRFYRSDLYKKYKEAKTDETEAGMIQHD 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2149g00001 582 CDD MFS_Mch1p_like 28 544 - -
Vium2149g00001 582 Pfam Major Facilitator Superfamily 351 555 IPR011701 GO:0022857|GO:0055085
Vium2149g00001 582 SUPERFAMILY MFS general substrate transporter 235 557 IPR036259 -
Vium2149g00001 582 SUPERFAMILY MFS general substrate transporter 30 268 IPR036259 -
Vium2149g00001 582 Pfam Nodulin-like 29 274 IPR010658 -
Vium2149g00001 582 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 30 564 - -
Vium2149g00001 582 Gene3D MFS general substrate transporter like domains 344 559 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2149g00001 Vium-Chr2149 12188 14290 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2149g00001 16 568 Nodulin-like Gene Family AT2G39210 57.885 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2149g00001 - - vra:106766696 1005.36