Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2137g00005 ATGGGAACTTTAGCAATATCATCTCTGAATTTGAACCCATCAACATATGCCATCGTTACTTTGATTGCGACGGTGCTGATATGGTGGTTCTGGAATGCACTCAACTGGGTGTGGCTGAGACCGAAGAGAATAGAGAGACGTCTGAAGGAGCAGGGTATCCTAGGCAATTCCTACCGTCCCTTCATCGGAGATATCAGAGATATGGTTAAAATGATCAAGGAAGTCAAATCCAAACCCATGGATCCTCACTCTAATGACATCGCACCTCGTGTGTTGCCTTATGTAGTTCACACCATCGCTAAATATGGTAAGAATTCATTTATGTGGCTTGGACCAAGACCAAGGCTATTCGTCTTGGATCCAGAAAAGTTCAAAGAAATGGCTACAAAAGTCTATGACTTTCAAAAGCCCGACACAAGTCCACTTTTCAAGCTCCTGGCTTCAGGATTTGCAAATTATGACGGTGACAAGTGGGCTAAACACAGAAAGATAGTGAGTCCGGCATTCAATGTAGAGAAATTGAAGATTTTAGTACCGATATTTTGCGAGAGTTGTGATGAGATGATTAGGCAATTGGAGAGTGCGTTATCTTCGTCCAATGGGTCGTCTGAGTTAGATTTATGGCCTTTCGTCCAAAACGTGTCAAGCGATGTCCTTGCTCGTGCAGGCTTTGGAAGCAGCTATCAAGAAGGAAAGAAAGTATTCGAACTTCAAAGGGAAATGCTTCAACTTACTATGACGCTTTTTAAGTTTGCTTTCATTCCAGGTTACAGGTTTCTGCCAACGCATACCAATAGGAGGATGAAAGCAATTGACAACGAAATAAGAGCATCACTTATGGGAATCATCAACCGAAGATTGAAAGCAATGGAAGCTGGGGAGCCTACAAACAATGACTTGTTGGGCATACTCTTGGAGTCAAATTACAAAGAAACTGAAAAAGGTAGTGGTGGAGGAATGAGTCTAAGAGAAGTAGTTGAAGAAGTGAAGTTATTTTACTTGGCAGGGCAGGAAGCAAATGCAGAGTTATTGGTCTGGACTCTGTTATTATTAAGCAAGCATCCTGATTGGCAAGCAAAGGCCAGGGAAGAGGTTTTGCAGGTCTTCGGTAATGAAAAACCAGATTATGAAAGGCTTGGACAGCTTAAAGTTGTGTCAATGATTCTACAGGAGAGTCTGAGATTATATCCACCTGTGGTTATGTTCGCTCGGTATCTTCGTAAAGATACAAAACTTGGAGAGTGGACAATTCCTGCAGGAGTGGAGCTTATAGTGCCTGTGTCAATACTACATCATGAAAAGGAGTATTGGGGCGATGATGCAGGAGAGTTCAATCCGGAAAGATTCTCAGAAGGTGTTTCAAAGGCAACGAAAGGGAAGCTTTCATACTTGCCATTTGGATGGGGTCCTCGACTCTGTATAGGACAAAACTTTGGTCTGTTAGAAGCAAAAGTAGCAGTGTCAATGATCCTGCAGCGTTTCTCCCTCCAGTTTTCTCCTTCTTATACTCATGCTCCCTCCTTTATTATTACTCTGCAGCCTGAGCGTGGTGCTCATATCATTTTACACAAACTCTAG 1578 0.4265 MGTLAISSLNLNPSTYAIVTLIATVLIWWFWNALNWVWLRPKRIERRLKEQGILGNSYRPFIGDIRDMVKMIKEVKSKPMDPHSNDIAPRVLPYVVHTIAKYGKNSFMWLGPRPRLFVLDPEKFKEMATKVYDFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKLKILVPIFCESCDEMIRQLESALSSSNGSSELDLWPFVQNVSSDVLARAGFGSSYQEGKKVFELQREMLQLTMTLFKFAFIPGYRFLPTHTNRRMKAIDNEIRASLMGIINRRLKAMEAGEPTNNDLLGILLESNYKETEKGSGGGMSLREVVEEVKLFYLAGQEANAELLVWTLLLLSKHPDWQAKAREEVLQVFGNEKPDYERLGQLKVVSMILQESLRLYPPVVMFARYLRKDTKLGEWTIPAGVELIVPVSILHHEKEYWGDDAGEFNPERFSEGVSKATKGKLSYLPFGWGPRLCIGQNFGLLEAKVAVSMILQRFSLQFSPSYTHAPSFIITLQPERGAHIILHKL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2137g00005 525 Gene3D Cytochrome P450 37 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2137g00005 525 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2137g00005 525 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2137g00005 525 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2137g00005 525 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2137g00005 525 CDD CYP72 92 521 - -
Vium2137g00005 525 PANTHER CYTOCHROME P450 FAMILY MEMBER 28 516 - -
Vium2137g00005 525 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2137g00005 525 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2137g00005 525 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2137g00005 525 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2137g00005 525 FunFam Cytochrome P450 734A1 38 525 - -
Vium2137g00005 525 SUPERFAMILY Cytochrome P450 89 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2137g00005 525 Pfam Cytochrome P450 100 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2137g00005 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2137g00005 Vium-Chr2137 36089 38698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2137g00005 19 525 Cytochrome P450 AT3G14690 52.860 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2137g00005 - K24179 gmx:100801959 957.977