Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2136g00015 ATGGCTTCTTCCTTTCGTCCCTCAATTTCTTCCTTCATGTTACCCTCCCTTTCTTCTTGCAACCCTTCTCAAAAGTTCTCTCTTTTTCATCTGGGTAGCGGTATTAGACGGTTTCATGATTTTGGCCTGAAACCTTCTAAGTTTTTGAGGCATGATGATGATAACTGCATGAGGGCGAAGGCATCTGGGAACACGTCCTCAATTGCTGCACCAGAAAATGCCCTGGATTGGGTCAAACATGACAAGAGAAGAATGCTTCATGTTGTGTATCGTGTTGGGGACTTGGACAAGACCATAAAATTTTATACAGAGTGCCTGGGAATGAAGTTGCTCAGACAGCGTGACATGCAAGAGCAGAGACATACTAATGCCTTTCTTGGATATGGGCCTGAGGATGCACACTTTGCTGTTGAACTCACATACAATTATGGGATTGACAAGTATGACATTGGAGATGGATTTGGTCATTTTGGTCTTGCTGTTGATGATATCTCAAGAATAGTGGAACTTGTCAGAGCTAAGGGTGGAAAAATTACTAGAGAGCCTATGCTTGTCAAGGGAGGCAACTCAGTAAATGCATTTATTGAAGATCCTGATGGTTATCAATTTGAACTTTTAGAAAGGGCTCCCTCTCCCGAGCCTTTGTGCAAAGTAATGCTTCGAGTTTGTGATCTTGACCGTTCCATCAAATTTTATGAGAAGGCTTTTGGTATGGAGCTACTTCGAACACAGGATGATCCAGAATCCAAGAACACAATAGCAATACTGGGATATGGTCCAGAGGAAAAATGTACTGTCCTGGAGTTGACTTACAACTATGGAGTCACGAAATATGATAAAGGAGATGCTTATGCTCAGATGATGTGTACAAAACTGCCGAAGCAATTAAACTTGCAGGAGGGAAGATTACTCGGGAACCTGGACCAATACCTGACATAA 939 0.4239 MASSFRPSISSFMLPSLSSCNPSQKFSLFHLGSGIRRFHDFGLKPSKFLRHDDDNCMRAKASGNTSSIAAPENALDWVKHDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRQRDMQEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAVDDISRIVELVRAKGGKITREPMLVKGGNSVNAFIEDPDGYQFELLERAPSPEPLCKVMLRVCDLDRSIKFYEKAFGMELLRTQDDPESKNTIAILGYGPEEKCTVLELTYNYGVTKYDKGDAYAQMMCTKLPKQLNLQEGRLLGNLDQYLT 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2136g00015 312 CDD GlxI_Ni 85 206 - -
Vium2136g00015 312 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 84 210 IPR029068 -
Vium2136g00015 312 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 84 208 IPR037523 -
Vium2136g00015 312 Gene3D - 56 209 IPR029068 -
Vium2136g00015 312 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 216 284 IPR029068 -
Vium2136g00015 312 NCBIfam lactoylglutathione lyase 84 209 IPR004361 GO:0004462|GO:0046872
Vium2136g00015 312 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 218 280 IPR004360 -
Vium2136g00015 312 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 85 205 IPR004360 -
Vium2136g00015 312 ProSitePatterns Glyoxalase I signature 1. 87 108 IPR018146 GO:0004462|GO:0046872
Vium2136g00015 312 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Vium2136g00015 312 Gene3D - 212 298 IPR029068 -
Vium2136g00015 312 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 214 312 IPR037523 -
Vium2136g00015 312 PANTHER LACTOYLGLUTATHIONE LYASE 61 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2136g00015 Vium-Chr2136 96443 100160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2136g00015 85 207 Calmodulin-binding Proteins AT1G08110 30.405 4.33e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2136g00015 K01759 - gmx:100781439 497.664